Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   STCNRZ302_RS03935 Genome accession   NZ_CP065489
Coordinates   747332..749080 (+) Length   582 a.a.
NCBI ID   WP_179970701.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ302     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 742332..754080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ302_RS03915 (STCNRZ302_03855) glyA 742723..743973 (+) 1251 WP_011227085.1 serine hydroxymethyltransferase -
  STCNRZ302_RS03920 (STCNRZ302_03860) - 743980..744957 (+) 978 WP_014608183.1 nucleoid-associated protein -
  STCNRZ302_RS03925 (STCNRZ302_03865) - 744959..745570 (+) 612 WP_041827001.1 lysozyme family protein -
  STCNRZ302_RS03930 (STCNRZ302_03870) - 745603..747342 (+) 1740 WP_179970702.1 ABC transporter ATP-binding protein -
  STCNRZ302_RS03935 (STCNRZ302_03875) rcrQ 747332..749080 (+) 1749 WP_179970701.1 ABC transporter ATP-binding protein Regulator
  STCNRZ302_RS03940 (STCNRZ302_03880) - 749258..749389 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  STCNRZ302_RS03945 (STCNRZ302_03885) dltA 749398..750948 (+) 1551 WP_022096817.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  STCNRZ302_RS03950 (STCNRZ302_03890) dltB 750945..752192 (+) 1248 WP_002950436.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  STCNRZ302_RS03955 (STCNRZ302_03895) dltC 752210..752449 (+) 240 WP_002950439.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  STCNRZ302_RS03960 (STCNRZ302_03900) dltD 752442..753710 (+) 1269 WP_179970700.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65894.49 Da        Isoelectric Point: 9.1923

>NTDB_id=448626 STCNRZ302_RS03935 WP_179970701.1 747332..749080(+) (rcrQ) [Streptococcus thermophilus strain CNRZ302]
MKARNNKSTLKRLCKDILSQRYLFALATVGTIVQVALTVYFPILLGDAVDAVLKMNAVFLMSRLIWQMLLLILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAIPFSYLDRQGTGDMVSRVTTDSDQLNNGLLMFFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIARKSYQLYRNQTKWRGKQTQLIEESLTQEALVQILNAQDQMVRNFNEVNGKYANYSQG
AIFYSSAVNPATRFFNSLLYALITGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNAVLDEAEVQGHFQFDHVQFGYLQNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRDITYYTRESLRKQIGMVLQETWLKVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPQGYDTFLRDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEYGTH
NQLMRTKGMYYRMQTAQKTQNN

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=448626 STCNRZ302_RS03935 WP_179970701.1 747332..749080(+) (rcrQ) [Streptococcus thermophilus strain CNRZ302]
ATGAAGGCTAGAAATAACAAGTCAACGCTTAAACGATTATGTAAAGATATCCTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTGTTCAAGTTGCTTTGACTGTTTACTTCCCTATTTTGCTTGGCGATGCAGTAGATGCTGTTCTTA
AGATGAATGCTGTCTTTTTGATGTCACGTTTGATTTGGCAGATGCTTTTGCTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCTTATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATCCATGC
TATTCCATTCAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGCGTGACTACAGATAGTGACCAATTGAATA
ATGGTCTCCTTATGTTCTTTAATCAATTTTTCGTTGGGCTTTTGACCATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCTTTATCAATGCTTGTGGCTCGTTTCATTGCTAGGAAGAGTTA
TCAACTCTATCGCAATCAAACCAAGTGGAGGGGCAAACAGACTCAGCTGATCGAAGAAAGTCTAACTCAGGAAGCTCTGG
TACAAATTCTAAATGCTCAAGACCAGATGGTTCGCAATTTTAATGAGGTTAATGGTAAGTATGCTAACTATTCACAGGGA
GCCATCTTTTACTCGTCAGCGGTTAACCCAGCTACACGTTTTTTTAATAGCTTGCTTTACGCTCTCATTACAGGTGTTGG
TGCCTATCGCATCATGTCGGGAGGCACATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACCA
AACCTTTTAATGACATTTCTTCTGTCCTATCTGAACTTCAAAGTGCTTTAGCCTGTGCTGATCGTCTATATATGATTTTA
GATGAAGATGAAATACCAGAAACGGGAAATGCGGTTTTGGACGAAGCAGAAGTTCAGGGACATTTTCAATTTGATCATGT
TCAATTTGGCTATTTGCAAAATAAACCTCTTATCAAGGATTTGAGTATTGATATTCCTGCTGCGAGTACCGTTGCTATTG
TTGGCCCAACAGGAGCAGGAAAATCTACTTTGATTAATCTTCTCATGCGTTTTTATGACTTGGATAAGGGTCAAATTTTG
CTAGACGGTCGAGATATTACGTATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAAGAAACTTGGCT
TAAAGTAGCTACTATCCATGATAATATTGCCTATGGCAATCCAAAAGCTAGTCGAGAGGAAGTAGTTGCAGCAGCCAAAG
CAGCTAATGCTGATTTCTTTATTAAACAATTACCTCAAGGCTACGACACTTTCTTGAGAGATGCAGGGCAATCTCTTTCA
CAAGGTCAACGTCAGTTACTAACTATTGCTCGTATATTTGTCAATGTTCCTAAAATTCTTATTTTGGATGAAGCAACATC
AAGTATTGATACCCGTACGGAGCTCCTTATTCAAGAAGCTTTTGCTAAACTGATGAAAGGTCGGACGAGTTTCATTATTG
CTCATAGATTATCTACCATTGAGAATGCAGACCTTATTTTGGTAATGAATAATGGTGATATCGTTGAATATGGAACACAT
AATCAATTAATGAGGACTAAGGGAATGTACTATCGTATGCAGACAGCCCAAAAAACACAAAATAATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.225

100

0.385