Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   STMM20_RS06180 Genome accession   NZ_CP065485
Coordinates   1211987..1213735 (-) Length   582 a.a.
NCBI ID   WP_014621430.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM20     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1206987..1218735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM20_RS06155 (STMM20_06185) dltD 1207357..1208625 (-) 1269 WP_011681024.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  STMM20_RS06160 (STMM20_06190) dltC 1208618..1208857 (-) 240 WP_002950439.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  STMM20_RS06165 (STMM20_06195) dltB 1208875..1210122 (-) 1248 WP_002950436.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  STMM20_RS06170 (STMM20_06200) dltA 1210119..1211669 (-) 1551 WP_347103487.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  STMM20_RS06175 (STMM20_06205) - 1211678..1211809 (-) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  STMM20_RS06180 (STMM20_06210) rcrQ 1211987..1213735 (-) 1749 WP_014621430.1 ABC transporter ATP-binding protein Regulator
  STMM20_RS06185 (STMM20_06215) - 1213725..1215464 (-) 1740 WP_011681019.1 ABC transporter ATP-binding protein -
  STMM20_RS06190 (STMM20_06220) - 1215497..1216108 (-) 612 WP_014621429.1 lysozyme family protein -
  STMM20_RS06195 (STMM20_06225) - 1216110..1217087 (-) 978 WP_014608183.1 nucleoid-associated protein -
  STMM20_RS06200 (STMM20_06230) glyA 1217094..1218344 (-) 1251 WP_014621428.1 serine hydroxymethyltransferase -
  STMM20_RS06205 (STMM20_06235) - 1218439..1218618 (-) 180 Protein_1190 threonylcarbamoyl-AMP synthase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65932.50 Da        Isoelectric Point: 9.2071

>NTDB_id=448233 STMM20_RS06180 WP_014621430.1 1211987..1213735(-) (rcrQ) [Streptococcus thermophilus strain MM20]
MKARNNKSTLKRLCKDILSQRYLFALATVGTIVQVALTVYFPILLGDAVDAVLKMNAVFLMSRLIWQMFLLILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAIPFSYLDRQGTGDMVSRVTTDSDQLNNGLLMFFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVTRFIARKSYQLYRNQTKWRGKQTQLIEESLTQEALVQILNAQDQMVRNFNEVNGKYANYSQG
AIFYSSAVNPATRFFNSLLYALITGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNAVLDEAEVQGHFQFDHVQFGYLQNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRDITYYTRESLRKQIGMVLQETWLKVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPQGYDTFLRDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
NQLMRTKGMYYRMQTAQKTQNN

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=448233 STMM20_RS06180 WP_014621430.1 1211987..1213735(-) (rcrQ) [Streptococcus thermophilus strain MM20]
ATGAAGGCTAGAAATAACAAGTCAACGCTTAAACGATTATGTAAAGATATCCTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTGTTCAAGTTGCTTTGACTGTTTACTTCCCTATTTTGCTTGGCGATGCAGTAGATGCTGTTCTTA
AGATGAATGCTGTCTTTTTGATGTCACGTTTGATTTGGCAGATGTTTTTGCTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCTTATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATTCCATTCAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGTGACCAATTGAATA
ATGGTCTCCTTATGTTCTTTAATCAATTTTTCGTTGGACTTTTGACCATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCTTTATCAATGCTTGTGACTCGTTTCATTGCTAGGAAGAGTTA
TCAACTCTATCGCAATCAAACCAAGTGGAGAGGCAAACAGACTCAGCTGATCGAAGAAAGTCTAACTCAGGAAGCTCTGG
TACAAATTCTAAATGCTCAAGACCAGATGGTTCGCAATTTTAATGAGGTTAATGGTAAGTATGCTAACTATTCACAGGGA
GCCATCTTTTACTCGTCAGCGGTTAACCCAGCTACACGTTTTTTTAATAGCTTGCTTTACGCTCTCATTACAGGTGTTGG
TGCCTATCGCATCATGTCGGGAGGCACATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACCA
AACCTTTTAATGATATTTCATCTGTCCTATCTGAACTTCAAAGTGCTTTAGCCTGTGCTGATCGTCTATATATGATTTTA
GATGAAGATGAAATACCAGAAACGGGAAATGCGGTTTTGGACGAAGCAGAAGTTCAGGGACATTTTCAATTTGATCATGT
TCAATTTGGCTATTTGCAAAATAAACCTCTTATTAAGGATTTGAGTATTGATATTCCTGCTGCGAGTACCGTTGCTATTG
TTGGCCCAACAGGAGCAGGAAAATCTACTTTGATTAATCTTCTCATGCGTTTTTATGACTTGGATAAGGGTCAAATTTTG
CTAGACGGTCGAGATATTACGTATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAAGAAACTTGGCT
TAAAGTAGCTACTATCCATGATAATATTGCCTATGGCAATCCAAAAGCTAGTCGAGAGGAAGTAGTTGCAGCAGCCAAAG
CAGCTAATGCTGATTTCTTTATTAAACAATTACCTCAAGGCTACGACACTTTCTTGAGAGATGCAGGGCAATCTCTTTCA
CAAGGTCAACGTCAGTTACTAACTATTGCTCGTATATTTGTCAATGTTCCTAAAATTCTTATTTTGGATGAAGCAACATC
AAGTATTGATACCCGTACGGAGCTCCTTATTCAAGAAGCTTTTGCTAAACTGATGAAAGGTCGGACGAGTTTCATTATTG
CTCATAGATTATCTACCATTGAGAATGCAGACCTTATTTTGGTAATGAATAATGGTGATATCGTTGAACATGGAACACAT
AATCAATTAATGAGGACTAAGGGAATGTACTATCGTATGCAGACAGCCCAAAAAACACAAAATAATTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(25-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.457

100

0.375