Detailed information NTG0044687

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: C270_RS07175
• Genome accession: NC_018673
• Coordinates: 1457974..1459257 (+)
• Length: 427 a.a.
• NCBI ID: WP_014974906.1
• Uniprot ID: K0DEA0
• Organism: Leuconostoc carnosum JB16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1452974..1464257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C270_RS07155 (C270_06915)	-	1454202..1454771 (-)	570	WP_050995384.1	GNAT family N-acetyltransferase	-
C270_RS07160 (C270_06920)	ezrA	1454827..1456554 (-)	1728	WP_014974903.1	septation ring formation regulator EzrA	-
C270_RS07165 (C270_06925)	rpsD	1456865..1457476 (+)	612	WP_014974904.1	30S ribosomal protein S4	-
C270_RS07170 (C270_06930)	-	1457593..1457967 (+)	375	WP_014974905.1	DUF1694 domain-containing protein	-
C270_RS07175 (C270_06935)	rarA	1457974..1459257 (+)	1284	WP_014974906.1	replication-associated recombination protein A	Machinery gene
C270_RS07180 (C270_06940)	-	1459676..1460125 (+)	450	WP_014974907.1	universal stress protein	-
C270_RS07185 (C270_06945)	-	1460242..1461105 (-)	864	WP_014974908.1	helix-turn-helix transcriptional regulator	-
C270_RS07190 (C270_06950)	-	1461105..1462238 (-)	1134	WP_014974909.1	D-alanine--D-alanine ligase family protein	-
C270_RS07195 (C270_06955)	-	1462295..1463275 (-)	981	WP_014974910.1	DUF2785 domain-containing protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46727.27 Da
• Isoelectric Point: 6.4524

>NTDB_id=44687 C270_RS07175 WP_014974906.1 1457974..1459257(+) (rarA) [Leuconostoc carnosum JB16]
MQQPLAYRMRPTKIEEIVGQQHLVGNGKIIWRMVAAKRLSSMILYGPPGTGKTSIASAIAGSSKYAFRMLNAATDTQKDL
QIVSEEAKMSGTVILLLDEIHRLNKVKQDFLLPHLESGAIILIGATTENPYINVTPAIRSRTQIFQVEPLTEADIKSAIE
RSLTDKKNGLGNYSVIIDDNAMTHLSRATNGDLRSALNGLEIAVLSTPVSDDGIIHLTLPIIEETIQHKALSADKDGDAH
YDVISALQKSIRGSDVDAALHYAARIIESGDLAILTRRLSVIAYEDIGLANPTAAEHAITAIQVAQTLGFPEARIPLANA
IIELALSPKSNAAYTAIDMAISDVQHGKVSDIPDHLKDSHYKGAAELGHGVSYIYPHDFDNDWVPQQYLPESIKDSHYFL
PKGNSQIEQSFKEIYQSLKKQQKKGLQ

Nucleotide

• Length: 1284 bp

>NTDB_id=44687 C270_RS07175 WP_014974906.1 1457974..1459257(+) (rarA) [Leuconostoc carnosum JB16]
ATGCAACAACCATTGGCCTATCGTATGCGGCCCACTAAAATTGAAGAGATTGTTGGTCAACAACATCTTGTTGGTAACGG
CAAGATTATTTGGCGTATGGTGGCAGCCAAGAGATTAAGCTCAATGATCTTATACGGCCCACCTGGCACTGGAAAAACTA
GTATTGCTTCTGCCATTGCCGGCTCATCAAAATATGCTTTTCGTATGTTAAACGCTGCAACCGATACCCAAAAAGATTTA
CAAATTGTGTCTGAAGAAGCTAAAATGTCTGGCACAGTTATTTTGTTGTTGGATGAAATTCATCGTCTCAACAAAGTAAA
ACAAGATTTTTTACTACCACATTTGGAATCTGGGGCTATTATTTTAATCGGCGCAACTACTGAAAATCCCTATATTAATG
TTACACCAGCTATTCGTTCACGTACGCAAATTTTCCAAGTTGAGCCGCTCACAGAAGCAGATATTAAGTCAGCAATAGAA
CGATCGCTGACTGATAAAAAAAACGGTCTCGGAAATTATTCAGTAATAATTGATGATAATGCGATGACACATTTATCACG
CGCAACTAATGGTGATTTACGTAGTGCGCTCAATGGTCTCGAAATCGCTGTCTTATCAACCCCAGTTTCTGATGACGGTA
TCATCCACCTGACATTACCAATTATTGAAGAAACAATTCAGCATAAAGCACTATCAGCTGATAAAGACGGTGATGCTCAC
TATGATGTGATTTCAGCCTTACAAAAATCAATACGTGGATCAGATGTTGACGCAGCATTACATTATGCAGCCCGAATCAT
TGAATCTGGTGATTTAGCCATTTTAACTCGTCGCTTAAGTGTTATTGCTTATGAAGATATCGGATTAGCAAACCCAACAG
CTGCTGAGCATGCCATAACAGCAATCCAAGTAGCACAAACACTTGGTTTCCCAGAAGCTCGTATTCCATTAGCCAATGCA
ATTATTGAACTCGCGCTCTCACCAAAATCAAATGCAGCATATACTGCCATTGATATGGCAATTAGCGACGTCCAGCATGG
TAAAGTATCAGATATCCCTGATCATTTAAAGGATTCCCATTATAAAGGTGCAGCTGAACTAGGTCACGGTGTATCATATA
TTTATCCGCACGACTTTGACAATGATTGGGTACCACAACAATACTTACCAGAGTCAATAAAAGACAGCCATTATTTCCTA
CCCAAGGGCAACTCACAAATTGAACAATCATTTAAAGAAATATATCAATCTTTAAAAAAACAACAGAAAAAAGGATTACA
ATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (172-252)

• MgsA AAA+ ATPase C terminal (MgsA_C) (253-418)

3D structure

• AlphaFold DB: K0DEA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	64.762	98.361	0.637