Detailed information NTG0446427

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: I5M77_RS07900
• Genome accession: NZ_CP065369
• Coordinates: 1612925..1614214 (-)
• Length: 429 a.a.
• NCBI ID: WP_021447448.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain 20-082A3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1607925..1619214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5M77_RS07875 (I5M77_07875)	bioA	1608405..1609685 (+)	1281	WP_025791983.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
I5M77_RS07880 (I5M77_07880)	-	1609755..1610021 (-)	267	WP_015296513.1	DksA/TraR family C4-type zinc finger protein	-
I5M77_RS07885 (I5M77_07885)	-	1610156..1610596 (-)	441	WP_025791980.1	hypothetical protein	-
I5M77_RS07890 (I5M77_07890)	-	1610590..1611156 (-)	567	WP_224067080.1	ATPase	-
I5M77_RS07895 (I5M77_07895)	serS	1611526..1612833 (-)	1308	WP_005495761.1	serine--tRNA ligase	-
I5M77_RS07900 (I5M77_07900)	rarA	1612925..1614214 (-)	1290	WP_021447448.1	replication-associated recombination protein A	Machinery gene
I5M77_RS07905 (I5M77_07905)	lolA	1614281..1614907 (-)	627	WP_005460060.1	outer membrane lipoprotein chaperone LolA	-
I5M77_RS07910 (I5M77_07910)	-	1614982..1618164 (-)	3183	WP_156216583.1	DNA translocase FtsK 4TM domain-containing protein	-
I5M77_RS07915 (I5M77_07915)	lrp	1618317..1618811 (-)	495	WP_005378234.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47564.76 Da
• Isoelectric Point: 5.8532

>NTDB_id=446427 I5M77_RS07900 WP_021447448.1 1612925..1614214(-) (rarA) [Vibrio parahaemolyticus strain 20-082A3]
MRPQTIEQYIGQQHILGPGKPLRRALEAGHVHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARVYKLTSLDKEEISLALNQAIN
DKERGLGDTPANFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAEVAGEKVSRFDNKGDIWYDLI
SAVHKSIRGSNPDAALYWAARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWDCFTRVGPAEGERAIAQAIVY
LACAPKSNAVYVAWKQALTDAHNLPEYEVPHHLRNAPTSLMKDMGYGAEYRYAHDEPGAYAAGEQYLPPEMADRKYYQPT
NRGLETKIGEKLDYLAKLDANSQQKRYEK

Nucleotide

• Length: 1290 bp

>NTDB_id=446427 I5M77_RS07900 WP_021447448.1 1612925..1614214(-) (rarA) [Vibrio parahaemolyticus strain 20-082A3]
ATGAGACCGCAAACTATTGAGCAGTACATCGGTCAGCAACACATTCTTGGCCCGGGTAAACCCCTGCGTCGCGCGTTAGA
GGCTGGCCATGTCCACTCAATGATCCTTTGGGGGCCTCCTGGTACAGGTAAAACCACGTTAGCGGAAGTCGCTGCTAATT
ACGCCAATGCGGAAGTTGAACGCGTGTCTGCGGTGACGTCCGGTGTGAAAGAGATTCGTGCTGCAATCGAAAAAGCGCGC
GAGAACAAAATGGCGGGTCGCCGCACCATCTTGTTTGTGGATGAGGTTCATCGCTTCAACAAATCGCAACAAGATGCTTT
CTTACCACATATTGAAGATGGAACCGTCACGTTTATTGGCGCAACGACAGAGAACCCATCTTTCGAACTGAATAACGCAT
TGTTGTCTCGTGCTCGAGTCTACAAGCTGACTTCACTGGATAAAGAAGAGATCTCACTCGCACTAAATCAAGCGATTAAC
GACAAAGAACGAGGCCTGGGCGATACGCCAGCGAACTTTGCTGATAATGTGTTAGACCGTCTAGCCGAGTTGGTGAACGG
CGATGCTCGCATGTCGCTTAACTACCTTGAACTTCTCTACGATATGGCAGAGGACAATGCGCAGGGTGAAAAAGAGATAA
CACTCAAACTGCTTGCTGAAGTAGCCGGGGAGAAAGTCTCTCGCTTCGATAATAAAGGCGACATTTGGTACGATTTGATC
TCCGCTGTGCACAAATCTATTCGTGGATCAAACCCAGATGCCGCTTTGTATTGGGCTGCTCGTATGATAGCTGCAGGTTG
TGATCCACTTTACATTGCCCGTCGATTACTTGCGATAGCATCGGAAGATGTCGGCAATGCGGACCCTAGAGCCATGCAAG
TTGCACTCTCCGCGTGGGACTGTTTTACACGCGTTGGTCCAGCAGAGGGTGAGCGTGCGATTGCTCAAGCAATTGTTTAT
CTCGCGTGCGCTCCAAAGAGTAATGCCGTTTATGTTGCTTGGAAACAAGCGCTCACTGACGCACATAACTTGCCTGAATA
TGAAGTGCCGCATCACTTGCGTAATGCACCCACCAGTCTGATGAAAGACATGGGCTATGGCGCAGAATATCGATATGCTC
ACGACGAGCCGGGTGCTTATGCTGCGGGTGAGCAATATTTGCCACCAGAAATGGCGGATCGTAAGTACTATCAGCCGACA
AATCGCGGTCTAGAAACCAAAATCGGCGAAAAGTTAGATTACTTGGCTAAATTAGACGCAAATAGCCAACAAAAGCGCTA
TGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (34-139)

• MgsA AAA+ ATPase C terminal (MgsA_C) (249-415)

• AAA C-terminal domain (AAA_assoc_2) (170-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.474	97.436	0.385