Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ICC24_RS15410 Genome accession   NZ_CP065029
Coordinates   2963404..2965761 (-) Length   785 a.a.
NCBI ID   WP_009329338.1    Uniprot ID   -
Organism   Bacillus licheniformis strain LCDD6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2958404..2970761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICC24_RS15385 (ICC24_15385) - 2958764..2959537 (-) 774 WP_003184191.1 electron transfer flavoprotein subunit beta/FixA family protein -
  ICC24_RS15390 (ICC24_15390) - 2959569..2960345 (-) 777 WP_009329335.1 enoyl-CoA hydratase -
  ICC24_RS15395 (ICC24_15395) - 2960348..2960950 (-) 603 WP_003184196.1 TetR/AcrR family transcriptional regulator -
  ICC24_RS15400 (ICC24_15400) - 2961092..2962771 (-) 1680 WP_016885568.1 AMP-binding protein -
  ICC24_RS15405 (ICC24_15405) - 2962981..2963385 (-) 405 WP_003184198.1 DUF350 domain-containing protein -
  ICC24_RS15410 (ICC24_15410) mutS/mutS2 2963404..2965761 (-) 2358 WP_009329338.1 endonuclease MutS2 Machinery gene
  ICC24_RS15415 (ICC24_15415) polX 2965778..2967493 (-) 1716 WP_003184202.1 DNA polymerase/3'-5' exonuclease PolX -
  ICC24_RS15420 (ICC24_15420) - 2967637..2968173 (-) 537 WP_061576084.1 CvpA family protein -
  ICC24_RS15425 (ICC24_15425) zapA 2968182..2968439 (-) 258 WP_003184205.1 cell division protein ZapA -
  ICC24_RS15430 (ICC24_15430) rnhC 2968589..2969530 (+) 942 WP_003184208.1 ribonuclease HIII -
  ICC24_RS22545 - 2969865..2970071 (+) 207 Protein_3038 hypothetical protein -

Sequence

Protein


Download         Length: 785 a.a.        Molecular weight: 87413.71 Da        Isoelectric Point: 5.7743

>NTDB_id=445444 ICC24_RS15410 WP_009329338.1 2963404..2965761(-) (mutS/mutS2) [Bacillus licheniformis strain LCDD6]
MQQKALSALEFHKVKEQLTEHAASSLGKEMLLELKPSRSLEEVKKLQEEVDEAGTVLRLKGSAPFGGLTDIRKALRRAEI
GSILSPAELTEISGLLYAAKQMKHFLEGLFEDGVEIPYLHQYAEKLIPLSELERDINSCIDDHGEVLDHASETLRGIRTQ
LRTLESRIRDRLESMLRSSSAQKMLSDTIITIRNDRFVIPVKQEYRSSYGGIVHDQSSSGATLFIEPQAIVDMNNALRQA
KVNEKQEIERILRVLTEKTAEHTNELFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQARHPLLPLDEVVPN
DIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIV
DILKDMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVINASVEFDIDTLSPTYK
LLIGVPGRSNAFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISE
WQEKKDKLYEEAEQKAAEKVKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELK
PGDEVKVLTFGQKGTLLEKTGAAEWNVQIGILKMKVKEKDLEFLKSAPEPEKQKTIAAVKGKDYHVSLELDLRGERYENA
LHRVEKYLDDAVLAGYPRVSIIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAGEGGSGVTIVELK

Nucleotide


Download         Length: 2358 bp        

>NTDB_id=445444 ICC24_RS15410 WP_009329338.1 2963404..2965761(-) (mutS/mutS2) [Bacillus licheniformis strain LCDD6]
TTGCAGCAAAAAGCGCTATCAGCACTTGAATTTCATAAAGTAAAAGAACAGCTCACAGAGCATGCGGCATCTTCTTTGGG
GAAGGAAATGCTTTTGGAACTCAAACCTTCCCGTTCGCTCGAAGAAGTTAAAAAGCTGCAGGAAGAAGTCGATGAAGCAG
GAACCGTCCTGCGTTTAAAAGGAAGCGCCCCTTTCGGCGGCCTTACGGACATTAGAAAAGCGTTAAGAAGGGCAGAAATC
GGCAGCATTTTAAGCCCGGCGGAATTGACTGAAATATCGGGTCTGCTATACGCAGCAAAACAGATGAAGCACTTTCTTGA
AGGCCTGTTCGAAGACGGGGTTGAGATTCCTTATCTTCATCAATATGCAGAAAAGCTCATACCGCTTTCCGAATTGGAAA
GGGACATCAATTCGTGCATCGATGATCATGGGGAAGTGCTTGATCATGCATCAGAGACGTTAAGGGGAATCAGGACCCAG
CTGCGGACGCTTGAATCAAGAATCAGGGACCGGCTGGAATCGATGCTGCGTTCTTCATCTGCGCAAAAAATGCTGTCGGA
TACGATCATCACGATTCGCAACGACCGCTTCGTCATCCCTGTCAAACAGGAGTACAGATCAAGCTACGGAGGAATCGTGC
ACGATCAGTCTTCTTCCGGTGCGACATTGTTTATCGAGCCTCAGGCGATTGTCGATATGAACAATGCGCTTCGCCAGGCA
AAAGTAAACGAAAAACAGGAGATTGAACGGATTTTGCGCGTCCTGACAGAAAAGACGGCAGAGCACACAAATGAGCTCTT
TCACGATGTCAAAGTCCTTCAGACGCTGGACTTTATTTTTGCAAAAGCAAAATATGCAAAAGCGACAAAAGCGGTTAAAC
CGGCTGTCAACGCTGACGGCTATGTCCGCCTGATTCAAGCCCGCCACCCGCTTTTGCCCCTGGATGAGGTCGTTCCGAAT
GATATTGAGCTCGGCGGAGAGTATACGACAATTGTCATCACGGGCCCGAACACGGGGGGGAAAACGGTGACGCTCAAAAC
GCTCGGGCTTTTGACCATGATGGCGCAGTCGGGATTGCACGTACCGGCGGAAGAAGGATCAGAGACCGCCGTATTTGATC
AAGTATTTGCCGATATCGGCGATGAACAGTCAATCGAACAAAGCTTAAGTACGTTCTCGTCGCATATGGTCAACATCGTC
GATATTTTGAAAGACATGACGGAAAACAGCCTTGTGCTTTTTGACGAGCTCGGTGCCGGAACAGACCCGCAGGAAGGCGC
GGCCCTTGCGATCAGCATCCTTGATGAGGTGTGCCAGACAGGCGCACGCGTCATTGCCACGACCCATTACCCGGAGCTGA
AGGCATACGGCTACAATCGCGAAAATGTCATTAATGCAAGCGTCGAATTTGATATCGATACACTATCACCGACATACAAG
CTTTTAATCGGAGTGCCCGGCCGAAGCAATGCGTTCGAAATCTCGAAGCGCCTCGGGCTGCCTGATTACCTGATCGGCCG
CGCAAAAGCGGAGATGACGGCCGAACATAATGAAGTTGATACGATGATCGCATCGCTGGAAGACAGCAAAAAGCGCGCAG
AAGCGGAGCTCAAGGAGACCGAAGCCATCCGCGCGGAAGCTGAAGCCCTTCACCGCGACCTGCAGCAGCAGATCAGCGAA
TGGCAGGAGAAAAAAGACAAGCTCTACGAAGAAGCGGAGCAAAAAGCGGCTGAAAAAGTCAAAGCAGCGATGAAAGAAGC
AGACGACATCATCCAGTCGCTCCGCATGATCAAAGAAGACCATAAAGCATTTAAAGACCATGAGCTGATCGAGGCGAAAA
AGCGCCTTGAAGAAGCCGTGCCTTCGTTTGAAAAAGCGAAAAAGCCGGCTCAGAAAAAAACGGACAAGCGCGAATTAAAA
CCGGGCGATGAAGTCAAAGTTTTAACCTTTGGCCAAAAAGGGACGCTGCTCGAAAAAACGGGTGCGGCCGAATGGAATGT
GCAAATCGGCATCCTGAAAATGAAGGTCAAGGAAAAGGATCTGGAATTCCTGAAATCGGCACCCGAACCCGAGAAACAAA
AAACGATCGCCGCCGTCAAAGGGAAAGATTATCACGTCTCGCTCGAACTCGACCTTAGGGGGGAGCGGTATGAAAATGCG
CTTCACCGGGTTGAAAAATACTTGGATGATGCGGTGCTTGCGGGCTATCCGAGAGTCTCGATCATTCACGGAAAAGGAAC
CGGCGCCCTCCGAAAAGGCGTCCAGGACCTATTGAAATCCCACCGCAATGTGAAAAACTCCCGGTTCGGCGAAGCGGGAG
AGGGAGGATCAGGAGTCACCATTGTCGAATTAAAATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(641-681)

Smr domain (Smr)

(710-785)

MutS domain V (MutS_V)

(331-512)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

83.057

100

0.831