Detailed information NTG0445435

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ICC24_RS14795
• Genome accession: NZ_CP065029
• Coordinates: 2845449..2846714 (+)
• Length: 421 a.a.
• NCBI ID: WP_011198157.1
• Uniprot ID: Q65GR6
• Organism: Bacillus licheniformis strain LCDD6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2840449..2851714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICC24_RS14775 (ICC24_14775)	-	2841395..2842045 (-)	651	WP_003183935.1	tetratricopeptide repeat protein	-
ICC24_RS14780 (ICC24_14780)	mnmA	2842139..2843257 (-)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
ICC24_RS14785 (ICC24_14785)	-	2843363..2844502 (-)	1140	WP_009327778.1	cysteine desulfurase family protein	-
ICC24_RS14790 (ICC24_14790)	cymR	2844523..2844939 (-)	417	WP_009327777.1	cysteine metabolism transcriptional regulator CymR	-
ICC24_RS14795 (ICC24_14795)	rarA	2845449..2846714 (+)	1266	WP_011198157.1	replication-associated recombination protein A	Machinery gene
ICC24_RS14800 (ICC24_14800)	-	2846795..2847559 (-)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
ICC24_RS14810 (ICC24_14810)	aspS	2847979..2849757 (-)	1779	WP_003183949.1	aspartate--tRNA ligase	-
ICC24_RS14815 (ICC24_14815)	hisS	2849772..2851046 (-)	1275	WP_003183951.1	histidine--tRNA ligase	-
ICC24_RS14820 (ICC24_14820)	-	2851421..2851585 (-)	165	WP_003183953.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46344.32 Da
• Isoelectric Point: 7.6230

>NTDB_id=445435 ICC24_RS14795 WP_011198157.1 2845449..2846714(+) (rarA) [Bacillus licheniformis strain LCDD6]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKSFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=445435 ICC24_RS14795 WP_011198157.1 2845449..2846714(+) (rarA) [Bacillus licheniformis strain LCDD6]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCCCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAAGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

3D structure

• AlphaFold DB: Q65GR6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.748	100	0.857