Detailed information NTG0445281

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: HJG54_RS26705
• Genome accession: NZ_CP053586
• Coordinates: 6213875..6214999 (-)
• Length: 374 a.a.
• NCBI ID: WP_316432251.1
• Uniprot ID: -
• Organism: Leptolyngbya sp. NK1-12
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6208875..6219999

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HJG54_RS26690 (HJG54_26680)	-	6209522..6211978 (-)	2457	WP_316432248.1	AMIN domain-containing protein	-
HJG54_RS26695 (HJG54_26685)	-	6212258..6213043 (-)	786	WP_316432249.1	hypothetical protein	-
HJG54_RS26700 (HJG54_26690)	-	6213040..6213873 (-)	834	WP_316432250.1	PilN domain-containing protein	-
HJG54_RS26705 (HJG54_26695)	pilM	6213875..6214999 (-)	1125	WP_316432251.1	type IV pilus assembly protein PilM	Machinery gene
HJG54_RS26710 (HJG54_26700)	-	6215493..6216785 (+)	1293	WP_316432252.1	ABC transporter substrate-binding protein	-
HJG54_RS26715 (HJG54_26705)	-	6216948..6217235 (-)	288	WP_035998987.1	DUF2288 domain-containing protein	-
HJG54_RS26720 (HJG54_26710)	-	6217608..6217775 (+)	168	WP_316432253.1	hypothetical protein	-
HJG54_RS26725 (HJG54_26715)	-	6217785..6218450 (-)	666	WP_316432254.1	lysophospholipid acyltransferase family protein	-
HJG54_RS26730 (HJG54_26720)	-	6218932..6219387 (+)	456	WP_316432255.1	hypothetical protein	-
HJG54_RS26735 (HJG54_26725)	-	6219623..6219928 (+)	306	WP_316432256.1	thioredoxin family protein	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 40878.95 Da
• Isoelectric Point: 4.5535

>NTDB_id=445281 HJG54_RS26705 WP_316432251.1 6213875..6214999(-) (pilM) [Leptolyngbya sp. NK1-12]
MVSGLKNVFSRKTKGIGVELTADRVNVARLKKKGQGFQLATLASAEVPEGIFQEGQIMDSAAMAEIIQSVLAETKLKVKH
AATAIPSGRDTVTRIIPVPAELDDRELREMVLNQEAGLYLPFPREEADVDYQKLGFFVDEDGIEKVQVLLVATRKEVTDS
YLETFRLAGLMVDILEISSFSLIRTIRQQLRQFTPQEAAAIVDIQFENTEISIVVDGVPQFSRTVPIGTYQVQTALSRAM
NLPPSRNTDLLQGMTIPIIPMDSMGTMPTNPTRGGVNPGTAAMLRVLGELADELRRSIDFYHNQGENMEVAQLLLAGPGG
AIGQLDEFFSQRLSLPASQVDPVTAMSLETDQEITPAQRVGLGVVLGLGLREAW

Nucleotide

• Length: 1125 bp

>NTDB_id=445281 HJG54_RS26705 WP_316432251.1 6213875..6214999(-) (pilM) [Leptolyngbya sp. NK1-12]
GTGGTTAGTGGTCTCAAAAACGTATTCTCAAGAAAAACGAAGGGAATTGGGGTCGAGTTGACAGCCGATCGGGTGAATGT
GGCTCGCCTCAAGAAAAAAGGTCAGGGATTTCAATTGGCGACGCTGGCCTCAGCTGAAGTTCCAGAAGGAATCTTTCAAG
AAGGGCAGATTATGGATTCGGCGGCGATGGCCGAGATCATTCAGTCTGTTCTAGCCGAAACGAAGCTCAAGGTCAAACAT
GCTGCGACTGCGATTCCCAGCGGTCGAGACACGGTGACGCGGATTATTCCGGTACCGGCGGAGCTGGACGATCGGGAGCT
GCGGGAAATGGTGTTGAACCAGGAAGCGGGTTTGTATCTGCCGTTTCCTCGCGAAGAAGCCGATGTGGATTACCAAAAGC
TAGGGTTCTTTGTCGATGAAGATGGCATCGAGAAAGTGCAGGTGCTGCTAGTAGCCACCCGCAAAGAAGTCACCGATTCC
TATCTCGAAACCTTCCGCTTGGCTGGACTGATGGTGGATATTTTGGAGATCAGCAGTTTTTCCTTGATTCGCACCATCCG
TCAGCAGCTGCGGCAGTTTACGCCTCAAGAGGCCGCTGCAATTGTCGATATCCAGTTCGAGAATACTGAAATTTCGATTG
TGGTGGATGGCGTGCCCCAGTTCTCCCGCACAGTGCCGATCGGAACCTATCAAGTGCAAACGGCACTGAGTCGGGCGATG
AACCTGCCTCCGTCTCGCAATACTGATTTGTTGCAAGGCATGACGATTCCGATTATTCCGATGGACAGCATGGGCACGAT
GCCGACCAATCCCACTCGTGGCGGTGTCAATCCGGGTACGGCAGCCATGTTGCGCGTTTTGGGAGAACTGGCTGATGAGT
TGCGCCGCTCGATCGACTTCTACCACAATCAAGGCGAGAATATGGAAGTAGCCCAGCTTCTGCTGGCTGGACCGGGTGGA
GCGATTGGCCAATTAGATGAATTTTTCTCGCAGCGATTGAGCCTACCGGCCAGTCAAGTCGATCCAGTGACCGCAATGTC
GTTAGAAACCGATCAGGAGATTACGCCTGCCCAGCGCGTCGGTTTAGGGGTGGTTTTGGGGTTAGGTTTACGGGAGGCAT
GGTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-242)

• Type IV pilus assembly protein PilM; (PilM_2) (289-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	62.466	99.733	0.623