Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HPB40_RS24170 | Genome accession | NZ_CP053568 |
| Coordinates | 4978049..4979029 (-) | Length | 326 a.a. |
| NCBI ID | WP_126347829.1 | Uniprot ID | - |
| Organism | Enterobacter cloacae strain MY490 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4973049..4984029
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPB40_RS24140 (HPB40_24080) | - | 4973925..4974422 (+) | 498 | WP_028027997.1 | SprT family zinc-dependent metalloprotease | - |
| HPB40_RS24145 (HPB40_24085) | endA | 4974517..4975224 (+) | 708 | WP_013098661.1 | deoxyribonuclease I | - |
| HPB40_RS24150 (HPB40_24090) | rsmE | 4975277..4976008 (+) | 732 | WP_013098662.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| HPB40_RS24155 (HPB40_24095) | gshB | 4976028..4976975 (+) | 948 | WP_013098663.1 | glutathione synthase | - |
| HPB40_RS24160 (HPB40_24100) | - | 4977062..4977622 (+) | 561 | WP_013098664.1 | YqgE/AlgH family protein | - |
| HPB40_RS24165 (HPB40_24105) | ruvX | 4977622..4978038 (+) | 417 | WP_006811925.1 | Holliday junction resolvase RuvX | - |
| HPB40_RS24170 (HPB40_24110) | pilT | 4978049..4979029 (-) | 981 | WP_126347829.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HPB40_RS24175 (HPB40_24115) | - | 4979047..4979748 (+) | 702 | WP_013098666.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| HPB40_RS24180 (HPB40_24120) | - | 4979770..4980336 (+) | 567 | WP_013098667.1 | YggT family protein | - |
| HPB40_RS24185 (HPB40_24125) | yggU | 4980333..4980620 (+) | 288 | WP_013098668.1 | DUF167 family protein YggU | - |
| HPB40_RS24190 (HPB40_24130) | - | 4980633..4981226 (+) | 594 | WP_013098669.1 | XTP/dITP diphosphatase | - |
| HPB40_RS24195 (HPB40_24135) | hemW | 4981219..4982367 (+) | 1149 | WP_013098670.1 | radical SAM family heme chaperone HemW | - |
| HPB40_RS24200 (HPB40_24140) | - | 4982403..4982522 (+) | 120 | Protein_4737 | DUF559 domain-containing protein | - |
| HPB40_RS24205 (HPB40_24145) | - | 4982590..4983306 (-) | 717 | WP_013098671.1 | DUF2884 domain-containing protein | - |
| HPB40_RS24210 (HPB40_24150) | - | 4983363..4983689 (-) | 327 | WP_003862421.1 | YggL family protein | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35666.68 Da Isoelectric Point: 6.3038
>NTDB_id=445173 HPB40_RS24170 WP_126347829.1 4978049..4979029(-) (pilT) [Enterobacter cloacae strain MY490]
MDVEEIVALSVKHNVSDLHLCSDSPPRWRRVGRLEPAPFPSPDVDALLKTWLNDEQQGAWWASGQVDFAVTLTGNQRLRA
SAFKQMKGNSITLRLLPRACPQLSALGVPRAIPELLSHDSGLILVTGATGSGKSTTLAAMVDFLNHQTDGHILTLEDPVE
FVYQSERCLIQQREIGLHSPSFAEALRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERLIDT
FPAQEKDPVRNQLAGSLRAVLAQRLLPDLQGGRVALYELLVNTPAAANLIREGKTWQLPGIIQTGQQAGMQNFDQSLAER
RAQGRL
MDVEEIVALSVKHNVSDLHLCSDSPPRWRRVGRLEPAPFPSPDVDALLKTWLNDEQQGAWWASGQVDFAVTLTGNQRLRA
SAFKQMKGNSITLRLLPRACPQLSALGVPRAIPELLSHDSGLILVTGATGSGKSTTLAAMVDFLNHQTDGHILTLEDPVE
FVYQSERCLIQQREIGLHSPSFAEALRAALREDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERLIDT
FPAQEKDPVRNQLAGSLRAVLAQRLLPDLQGGRVALYELLVNTPAAANLIREGKTWQLPGIIQTGQQAGMQNFDQSLAER
RAQGRL
Nucleotide
Download Length: 981 bp
>NTDB_id=445173 HPB40_RS24170 WP_126347829.1 4978049..4979029(-) (pilT) [Enterobacter cloacae strain MY490]
ATGGATGTGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCCGATCTACACCTGTGCAGTGATTCGCCACCGCG
CTGGCGCAGAGTAGGCCGCCTTGAACCGGCTCCCTTTCCCTCTCCCGATGTGGATGCGTTACTGAAAACGTGGCTCAACG
ATGAGCAGCAGGGGGCATGGTGGGCAAGCGGGCAGGTGGATTTTGCCGTGACCCTTACGGGAAACCAGCGTCTGCGCGCA
AGTGCCTTTAAACAGATGAAGGGCAACTCCATCACGCTACGCCTGTTGCCCCGGGCCTGTCCGCAGCTCTCCGCTTTGGG
TGTTCCCCGGGCTATCCCGGAACTCTTATCCCACGACAGTGGGCTGATACTGGTGACGGGGGCAACCGGCAGCGGCAAAT
CTACCACCCTTGCGGCAATGGTGGATTTTCTTAATCACCAGACGGATGGGCATATTCTGACGCTGGAAGATCCGGTGGAG
TTTGTCTATCAGAGTGAACGTTGCCTGATTCAGCAGCGAGAGATCGGCCTGCACAGTCCCTCATTTGCCGAGGCGCTGCG
CGCTGCGTTGCGTGAAGATCCGGATGTCATCCTGCTGGGAGAACTGCGCGACAGCGAAACGATCCGCCTGGCGCTGACGG
CCGCTGAAACCGGGCATCTGGTGCTGGCGACGCTGCACACCCGCGGTGCCTCTCAGGCGATTGAACGGCTGATCGATACG
TTCCCGGCGCAGGAGAAAGACCCGGTGCGTAATCAGCTGGCCGGCAGCCTGCGGGCGGTGCTGGCGCAAAGACTGCTTCC
CGACCTGCAGGGTGGGCGCGTCGCGTTGTATGAACTGCTGGTGAATACGCCAGCGGCAGCGAACCTTATCCGCGAAGGTA
AAACGTGGCAGTTGCCCGGGATTATTCAAACCGGTCAGCAGGCGGGGATGCAGAACTTTGACCAGAGCCTGGCAGAGCGA
CGGGCGCAGGGGCGGTTGTAA
ATGGATGTGGAAGAAATTGTGGCCCTTAGTGTAAAGCATAATGTCTCCGATCTACACCTGTGCAGTGATTCGCCACCGCG
CTGGCGCAGAGTAGGCCGCCTTGAACCGGCTCCCTTTCCCTCTCCCGATGTGGATGCGTTACTGAAAACGTGGCTCAACG
ATGAGCAGCAGGGGGCATGGTGGGCAAGCGGGCAGGTGGATTTTGCCGTGACCCTTACGGGAAACCAGCGTCTGCGCGCA
AGTGCCTTTAAACAGATGAAGGGCAACTCCATCACGCTACGCCTGTTGCCCCGGGCCTGTCCGCAGCTCTCCGCTTTGGG
TGTTCCCCGGGCTATCCCGGAACTCTTATCCCACGACAGTGGGCTGATACTGGTGACGGGGGCAACCGGCAGCGGCAAAT
CTACCACCCTTGCGGCAATGGTGGATTTTCTTAATCACCAGACGGATGGGCATATTCTGACGCTGGAAGATCCGGTGGAG
TTTGTCTATCAGAGTGAACGTTGCCTGATTCAGCAGCGAGAGATCGGCCTGCACAGTCCCTCATTTGCCGAGGCGCTGCG
CGCTGCGTTGCGTGAAGATCCGGATGTCATCCTGCTGGGAGAACTGCGCGACAGCGAAACGATCCGCCTGGCGCTGACGG
CCGCTGAAACCGGGCATCTGGTGCTGGCGACGCTGCACACCCGCGGTGCCTCTCAGGCGATTGAACGGCTGATCGATACG
TTCCCGGCGCAGGAGAAAGACCCGGTGCGTAATCAGCTGGCCGGCAGCCTGCGGGCGGTGCTGGCGCAAAGACTGCTTCC
CGACCTGCAGGGTGGGCGCGTCGCGTTGTATGAACTGCTGGTGAATACGCCAGCGGCAGCGAACCTTATCCGCGAAGGTA
AAACGTGGCAGTTGCCCGGGATTATTCAAACCGGTCAGCAGGCGGGGATGCAGAACTTTGACCAGAGCCTGGCAGAGCGA
CGGGCGCAGGGGCGGTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.