Detailed information NTG0445053

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ITP52_RS18210
• Genome accession: NZ_CP064818
• Coordinates: 3606849..3608114 (-)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3601849..3613114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ITP52_RS18185 (ITP52_18185)	yrzK	3602092..3602262 (+)	171	WP_004399157.1	YrzK family protein	-
ITP52_RS18190 (ITP52_18190)	hisS	3602644..3603918 (+)	1275	WP_014480430.1	histidine--tRNA ligase	-
ITP52_RS18195 (ITP52_18195)	aspS	3603932..3605710 (+)	1779	WP_015714438.1	aspartate--tRNA ligase	-
ITP52_RS18205 (ITP52_18205)	tcdA	3606045..3606809 (+)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
ITP52_RS18210 (ITP52_18210)	rarA	3606849..3608114 (-)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
ITP52_RS18215 (ITP52_18215)	cymR	3608317..3608733 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ITP52_RS18220 (ITP52_18220)	iscSA	3608752..3609891 (+)	1140	WP_041850172.1	cysteine desulfurase family protein	-
ITP52_RS18225 (ITP52_18225)	mnmA	3609922..3611037 (+)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
ITP52_RS18230 (ITP52_18230)	yrrB	3611123..3611743 (+)	621	WP_010886584.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=445053 ITP52_RS18210 WP_014480427.1 3606849..3608114(-) (rarA) [Bacillus subtilis strain SH1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=445053 ITP52_RS18210 WP_014480427.1 3606849..3608114(-) (rarA) [Bacillus subtilis strain SH1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993