Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HKK57_RS07300 Genome accession   NZ_CP052857
Coordinates   1595829..1596236 (-) Length   135 a.a.
NCBI ID   WP_029300456.1    Uniprot ID   -
Organism   Pseudomonas sp. ADAK21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1590829..1601236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HKK57_RS07285 (HKK57_07285) - 1592822..1594873 (-) 2052 WP_070993972.1 methyl-accepting chemotaxis protein -
  HKK57_RS07290 (HKK57_07290) - 1594870..1595406 (-) 537 WP_029300451.1 chemotaxis protein CheW -
  HKK57_RS07295 (HKK57_07295) pilH 1595419..1595784 (-) 366 WP_029300454.1 twitching motility response regulator PilH -
  HKK57_RS07300 (HKK57_07300) pilG 1595829..1596236 (-) 408 WP_029300456.1 twitching motility response regulator PilG Regulator
  HKK57_RS07305 (HKK57_07305) gshB 1596476..1597429 (+) 954 WP_029300457.1 glutathione synthase -
  HKK57_RS07310 (HKK57_07310) - 1597507..1598406 (+) 900 WP_029300459.1 energy transducer TonB -
  HKK57_RS07315 (HKK57_07315) - 1598597..1599166 (+) 570 WP_029300463.1 YqgE/AlgH family protein -
  HKK57_RS07320 (HKK57_07320) ruvX 1599166..1599603 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  HKK57_RS07325 (HKK57_07325) pyrR 1599686..1600192 (+) 507 WP_029300467.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HKK57_RS07330 (HKK57_07330) - 1600217..1601221 (+) 1005 WP_029300469.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.47 Da        Isoelectric Point: 6.9682

>NTDB_id=441782 HKK57_RS07300 WP_029300456.1 1595829..1596236(-) (pilG) [Pseudomonas sp. ADAK21]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
DIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=441782 HKK57_RS07300 WP_029300456.1 1595829..1596236(-) (pilG) [Pseudomonas sp. ADAK21]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACCGCTGAAACGCTGTT
GAAGAACGTAGGGTGCGAAGTCATCACGGCCATCGACGGTTTTGATGCCCTGGCCAGGATCGTTGACCATCACCCGCACA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTCAAGAACAACCCGGCGTTCAAG
GACATCCCGGTGATCATGCTGTCGTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTATGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659