Detailed information NTG0441104

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: IPZ55_RS27465
• Genome accession: NZ_CP063844
• Coordinates: 6206035..6207399 (+)
• Length: 454 a.a.
• NCBI ID: WP_003947047.1
• Uniprot ID: A0ABR4S6Y1
• Organism: Streptomyces sp. A10(2020)
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6201035..6212399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IPZ55_RS27445 (IPZ55_27260)	-	6202049..6202879 (-)	831	WP_031177471.1	peptidylprolyl isomerase	-
IPZ55_RS27450 (IPZ55_27265)	-	6203044..6203763 (+)	720	WP_026282514.1	MBL fold metallo-hydrolase	-
IPZ55_RS27455 (IPZ55_27270)	hisS	6203778..6205040 (+)	1263	WP_075987587.1	histidine--tRNA ligase	-
IPZ55_RS27460 (IPZ55_27275)	-	6205323..6205967 (+)	645	WP_015508165.1	vitamin K epoxide reductase family protein	-
IPZ55_RS27465 (IPZ55_27280)	rarA	6206035..6207399 (+)	1365	WP_003947047.1	replication-associated recombination protein A	Machinery gene
IPZ55_RS27470 (IPZ55_27285)	rpsD	6207768..6208382 (+)	615	WP_003947046.1	30S ribosomal protein S4	-
IPZ55_RS27475 (IPZ55_27290)	-	6208630..6209082 (+)	453	WP_026047935.1	DUF948 domain-containing protein	-
IPZ55_RS27480 (IPZ55_27295)	-	6209089..6209451 (+)	363	WP_067410773.1	hypothetical protein	-
IPZ55_RS27485 (IPZ55_27300)	alaS	6209451..6212123 (+)	2673	WP_003947043.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 47947.26 Da
• Isoelectric Point: 6.2449

>NTDB_id=441104 IPZ55_RS27465 WP_003947047.1 6206035..6207399(+) (rarA) [Streptomyces sp. A10(2020)]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLKPGSPLRRLVGEGGGGPAGPSSVFLWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIDGARRASGGFGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLEPLTDEDLRGLVHRALTDERGLAGSVTLAEDAEAHLLRVAGGDARRALTALEAGAGAALDKGEAE
ITLTTLEESVDRAAVAYDRAGDQHYDVASALIKSIRGSDVDAALHYLARMIDAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAALEDVRKGHAGPVPTHLRDGHYKGAAKLGHAQGYIY
PHDVPGAIAAQQYAPDALAGKRYYQPTRYGAEARYADVVEKVRERLAEGGRGEG

Nucleotide

• Length: 1365 bp

>NTDB_id=441104 IPZ55_RS27465 WP_003947047.1 6206035..6207399(+) (rarA) [Streptomyces sp. A10(2020)]
GTGGAACCCGACCTCTTCACCGCAGCAGCCGAGGACCGCCAGGAGAAGGACCCGTCCAGCAGCCCCCTGGCCGTCCGGAT
GCGCCCCCGGACCCTGGACGAGGTGGTCGGCCAGCAGCACCTGCTCAAGCCCGGATCGCCGCTGCGCCGCCTCGTCGGCG
AGGGCGGCGGCGGCCCGGCCGGCCCCTCCTCCGTCTTCCTCTGGGGCCCGCCCGGCATCGGCAAGACGACCCTCGCGTAC
GTGGTCAGCAAGGCGACCAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCCGGGGTCAAGGAGGTGCGCGCCGTCAT
CGACGGCGCCCGCCGCGCCTCCGGCGGCTTCGGCAAGGAGACCGTCCTCTTCCTCGACGAGATCCACCGCTTCTCCAAGG
CCCAGCAGGACTCCCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCCTCATCGCCGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTCTCCCGCTCCCTGCTGCTCACCCTGGAGCCGCTGACCGACGAGGACCTGCGCGGCCTCGT
CCACCGCGCCCTCACCGACGAGCGGGGCCTGGCCGGCTCCGTCACCCTCGCCGAGGACGCCGAGGCCCACCTGCTGCGGG
TCGCCGGGGGTGACGCCCGCCGGGCCCTGACCGCCCTGGAGGCGGGCGCCGGGGCCGCGCTCGACAAGGGCGAGGCGGAG
ATCACCCTCACCACCCTCGAGGAGTCGGTGGACCGGGCCGCCGTCGCCTACGACCGCGCCGGCGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCCGCCCTGCACTACCTGGCCCGGATGATCGACGCCG
GGGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCGGCCAGCGAGGACATCGGCCTCGCCGACCCCACCGCCCTG
CCCACCGCGGTCGCCGCCGCCCAGGCCGTGGCCATGATCGGCTTCCCCGAGGCCGCGCTGACCCTCAGCCACGCCACCAT
CGCCCTCGCCCTGGCCCCCAAGTCCAACGCCGCCACCACCGCCATCGGCGCCGCCCTGGAGGACGTCCGCAAGGGCCACG
CCGGACCGGTCCCCACCCACCTGCGGGACGGCCACTACAAGGGCGCGGCCAAGCTCGGCCACGCCCAGGGGTACATCTAC
CCGCACGACGTCCCCGGCGCCATCGCCGCCCAGCAGTACGCACCGGACGCCCTCGCCGGGAAGCGGTACTACCAGCCCAC
CCGGTACGGCGCGGAGGCCCGCTACGCCGACGTGGTCGAGAAGGTCCGCGAGCGCCTCGCCGAGGGCGGCCGCGGCGAGG
GCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.419	94.714	0.421