Detailed information NTG0439915

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: HHM65_RS09360
• Genome accession: NZ_CP051624
• Coordinates: 1891339..1892271 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1886339..1897271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HHM65_RS09335 (HHM65_09340)	tsaD	1886829..1887845 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
HHM65_RS09340 (HHM65_09345)	rimI	1887835..1888260 (-)	426	WP_015058054.1	ribosomal protein S18-alanine N-acetyltransferase	-
HHM65_RS09345 (HHM65_09350)	tsaB	1888262..1888960 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
HHM65_RS09350 (HHM65_09355)	-	1889246..1889476 (+)	231	WP_015058055.1	DNA-dependent RNA polymerase subunit epsilon	-
HHM65_RS09355 (HHM65_09360)	rnjA	1889478..1891160 (+)	1683	WP_003056700.1	ribonuclease J1	-
HHM65_RS09360 (HHM65_09365)	amiF	1891339..1892271 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
HHM65_RS09365 (HHM65_09370)	oppD	1892264..1893316 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
HHM65_RS09370 (HHM65_09375)	-	1893328..1894359 (-)	1032	WP_003058013.1	ABC transporter permease	-
HHM65_RS09375 (HHM65_09380)	-	1894369..1895283 (-)	915	WP_003052794.1	ABC transporter permease	-
HHM65_RS09380 (HHM65_09385)	-	1895551..1897206 (-)	1656	WP_170078205.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=439915 HHM65_RS09360 WP_003060110.1 1891339..1892271(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=439915 HHM65_RS09360 WP_003060110.1 1891339..1892271(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A74]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTTTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526