Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SAVC_RS07435 | Genome accession | NC_016912 |
| Coordinates | 1514867..1515166 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus subsp. aureus VC40 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1509867..1520166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAVC_RS07410 (SAVC_06925) | gcvPA | 1511079..1512425 (-) | 1347 | WP_000019685.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SAVC_RS07415 (SAVC_06930) | gcvT | 1512445..1513536 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SAVC_RS07420 (SAVC_06935) | - | 1513695..1514219 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| SAVC_RS07425 | - | 1514209..1514355 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SAVC_RS07430 (SAVC_06940) | comGF | 1514452..1514949 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAVC_RS07435 (SAVC_06945) | comGE | 1514867..1515166 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SAVC_RS07440 (SAVC_06950) | comGD | 1515153..1515599 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAVC_RS07445 (SAVC_06955) | comGC | 1515577..1515888 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAVC_RS07450 (SAVC_06960) | comGB | 1515902..1516972 (-) | 1071 | Protein_1427 | competence type IV pilus assembly protein ComGB | - |
| SAVC_RS07455 (SAVC_06965) | comGA | 1516944..1517918 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAVC_RS07460 (SAVC_06970) | - | 1517970..1518593 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SAVC_RS07465 (SAVC_06975) | - | 1518590..1518919 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SAVC_RS07470 (SAVC_06980) | - | 1518919..1519905 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SAVC_RS07475 (SAVC_06985) | - | 1519902..1520105 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=43987 SAVC_RS07435 WP_000844413.1 1514867..1515166(-) (comGE) [Staphylococcus aureus subsp. aureus VC40]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=43987 SAVC_RS07435 WP_000844413.1 1514867..1515166(-) (comGE) [Staphylococcus aureus subsp. aureus VC40]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |