Detailed information NTG0439855

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: HG697_RS09125
• Genome accession: NZ_CP051623
• Coordinates: 1845392..1846324 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1840392..1851324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG697_RS09100 (HG697_09105)	tsaD	1840882..1841898 (-)	1017	WP_003056674.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
HG697_RS09105 (HG697_09110)	rimI	1841888..1842313 (-)	426	WP_015058054.1	ribosomal protein S18-alanine N-acetyltransferase	-
HG697_RS09110 (HG697_09115)	tsaB	1842315..1843013 (-)	699	WP_003062223.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
HG697_RS09115 (HG697_09120)	-	1843299..1843529 (+)	231	WP_015058055.1	DNA-dependent RNA polymerase subunit epsilon	-
HG697_RS09120 (HG697_09125)	rnjA	1843531..1845213 (+)	1683	WP_003056700.1	ribonuclease J1	-
HG697_RS09125 (HG697_09130)	amiF	1845392..1846324 (-)	933	WP_003060110.1	ATP-binding cassette domain-containing protein	Regulator
HG697_RS09130 (HG697_09135)	oppD	1846317..1847369 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
HG697_RS09135 (HG697_09140)	-	1847381..1848412 (-)	1032	WP_003058013.1	ABC transporter permease	-
HG697_RS09140 (HG697_09145)	-	1848422..1849336 (-)	915	WP_003052794.1	ABC transporter permease	-
HG697_RS09145 (HG697_09150)	-	1849604..1851259 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=439855 HG697_RS09125 WP_003060110.1 1845392..1846324(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=439855 HG697_RS09125 WP_003060110.1 1845392..1846324(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A19]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTTTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526