Detailed information NTG0438737

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HBN37_RS10610
• Genome accession: NZ_CP051474
• Coordinates: 2190651..2191352 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain VB2107
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2185651..2196352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HBN37_RS10580 (HBN37_10580)	-	2185957..2186400 (-)	444	WP_001246675.1	SRPBCC family protein	-
HBN37_RS10585 (HBN37_10585)	tadA	2186470..2186973 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
HBN37_RS10590 (HBN37_10590)	-	2186980..2188104 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HBN37_RS10595 (HBN37_10595)	ung	2188101..2188814 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
HBN37_RS10600 (HBN37_10600)	-	2188865..2189461 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
HBN37_RS10605 (HBN37_10605)	gspK	2189692..2190651 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
HBN37_RS10610 (HBN37_10610)	xcpW	2190651..2191352 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HBN37_RS10615 (HBN37_10615)	xcpV	2191352..2191732 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
HBN37_RS10620 (HBN37_10620)	-	2191722..2192276 (-)	555	WP_000841373.1	type II secretion system protein	-
HBN37_RS10625 (HBN37_10625)	-	2192286..2192894 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HBN37_RS10630 (HBN37_10630)	-	2192932..2193705 (-)	774	WP_000497298.1	TatD family hydrolase	-
HBN37_RS10635 (HBN37_10635)	-	2193723..2194064 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
HBN37_RS10640 (HBN37_10640)	-	2194076..2195056 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
HBN37_RS10645 (HBN37_10645)	kdsB	2195068..2195829 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=438737 HBN37_RS10610 WP_000594589.1 2190651..2191352(-) (xcpW) [Acinetobacter baumannii strain VB2107]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=438737 HBN37_RS10610 WP_000594589.1 2190651..2191352(-) (xcpW) [Acinetobacter baumannii strain VB2107]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996