Detailed information NTG0436974

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: INP89_RS03690
• Genome accession: NZ_CP063127
• Coordinates: 737596..738936 (-)
• Length: 446 a.a.
• NCBI ID: WP_012055500.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M1C112_1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 732596..743936

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INP89_RS03670 (INP89_03665)	-	732954..734474 (-)	1521	WP_048954502.1	Na+/H+ antiporter NhaC family protein	-
INP89_RS03675 (INP89_03670)	-	734906..735310 (+)	405	WP_005647241.1	H-NS family nucleoid-associated regulatory protein	-
INP89_RS03680 (INP89_03675)	purU	735380..736216 (+)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-
INP89_RS03685 (INP89_03680)	aroA	736216..737514 (+)	1299	WP_012055501.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
INP89_RS03690 (INP89_03685)	rarA	737596..738936 (-)	1341	WP_012055500.1	replication-associated recombination protein A	Machinery gene
INP89_RS03695 (INP89_03690)	lolA	738997..739614 (-)	618	WP_042611209.1	outer membrane lipoprotein chaperone LolA	-
INP89_RS03700 (INP89_03695)	-	739632..742364 (-)	2733	WP_112083205.1	DNA translocase FtsK	-
INP89_RS03705 (INP89_03700)	lrp	742366..742845 (-)	480	WP_005664572.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50305.14 Da
• Isoelectric Point: 6.1388

>NTDB_id=436974 INP89_RS03690 WP_012055500.1 737596..738936(-) (rarA) [Haemophilus influenzae strain M1C112_1]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMIFWGPPGTGKTTLAEIIAQCINAEVER
IFAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQILQQAIEDPKRGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETDNGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TREGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELQDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=436974 INP89_RS03690 WP_012055500.1 737596..738936(-) (rarA) [Haemophilus influenzae strain M1C112_1]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCAGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGCCATATTCATTCTATGA
TTTTCTGGGGGCCTCCAGGTACGGGAAAAACAACGCTCGCAGAGATTATTGCACAATGTATTAATGCAGAAGTAGAGCGA
ATTTTTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAATTTTGCAGCAAGCTATAGAAGATCCTAAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAACGGACAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGTGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCACGAATTTTAACAGCGGGTGGAGACCCTTTATATGTCGCGCGCCGAT
TACTTGCTATTGCTTCAGAAGATGTGGGAAATGCGGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGAGGGGGCTTATGAAGGGGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCAGTAGCCCCAAAAAGTAATGC
GGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTACAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	38.534	94.843	0.365