Detailed information NTG0043697

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: LPV_RS09355
• Genome accession: NC_018140
• Coordinates: 2077012..2078316 (-)
• Length: 434 a.a.
• NCBI ID: WP_014844139.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2072012..2083316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPV_RS09335 (LPV_2029)	fliF	2072209..2073843 (-)	1635	WP_014844135.1	flagellar basal-body MS-ring/collar protein FliF	-
LPV_RS09340 (LPV_2030)	fliE	2074016..2074330 (-)	315	WP_014844136.1	flagellar hook-basal body complex protein FliE	-
LPV_RS09345 (LPV_2031)	fleR	2074345..2075658 (-)	1314	WP_014844137.1	sigma-54-dependent response regulator transcription factor FleR	-
LPV_RS09350 (LPV_2032)	-	2075682..2076713 (-)	1032	WP_014844138.1	sensor histidine kinase	-
LPV_RS09355 (LPV_2033)	rarA	2077012..2078316 (-)	1305	WP_014844139.1	replication-associated recombination protein A	Machinery gene
LPV_RS09360 (LPV_2034)	lolA	2078332..2078940 (-)	609	WP_014844140.1	outer membrane lipoprotein chaperone LolA	-
LPV_RS09365 (LPV_2035)	-	2078943..2081327 (-)	2385	WP_027268379.1	DNA translocase FtsK	-
LPV_RS09370 (LPV_2036)	trxB	2081400..2082350 (+)	951	WP_014844142.1	thioredoxin-disulfide reductase	-
LPV_RS09375 (LPV_2037)	aat	2082353..2083021 (+)	669	WP_014844143.1	leucyl/phenylalanyl-tRNA--protein transferase	-

Sequence

Protein

• Length: 434 a.a.
• Molecular weight: 48636.01 Da
• Isoelectric Point: 7.0467

>NTDB_id=43697 LPV_RS09355 WP_014844139.1 2077012..2078316(-) (rarA) [Legionella pneumophila subsp. pneumophila]
MSLFNKEPDPPLAESLRPQHINEVIGQSHLLGEGKPLRLCFMGSKLHSMILWGPPGVGKTTIARLTAQAFDCEWIALSAV
FSGVKDIRAAIEKAQEYLIHDKQTILFIDEIHRFNKAQQDALLPYTESGLITFIGATTENPSFEVNPALLSRAQVYVLKP
LSEQELKLLFLRAKQRALSSLQFTEEAMDFLISCADGDARRLLNLLEQTKTACLTIKTAVVDVELLHNVIVQSGRRFDKG
GEAFYDQISALHKSVRGSNPDAALYWLCRMLDGGVDPYYLARRIIRMSWEDIGLADPKAIQIANDAAATYERLGSPEGEL
ALAQAVIYLSVAAKSNAGYVAFNQAMEFIKRDKSREVPIHLRNAPTQLMKKLGYGHEYRYAHDEPHGYAAGECYLPEGMP
EVNWYNPVQRGLETKIAEKLAFLRQLDKDMKKKV

Nucleotide

• Length: 1305 bp

>NTDB_id=43697 LPV_RS09355 WP_014844139.1 2077012..2078316(-) (rarA) [Legionella pneumophila subsp. pneumophila]
ATGAGCCTATTCAATAAAGAACCTGATCCACCATTGGCTGAAAGTTTAAGGCCTCAGCATATCAATGAGGTCATAGGTCA
AAGTCATTTGCTTGGAGAGGGTAAACCCCTAAGACTTTGTTTTATGGGCTCCAAATTGCATTCTATGATCTTATGGGGGC
CACCAGGGGTCGGTAAGACTACTATAGCAAGATTAACCGCACAGGCTTTTGATTGTGAATGGATAGCATTATCAGCTGTG
TTTTCGGGTGTTAAGGATATTCGAGCTGCGATTGAGAAAGCGCAGGAATATTTAATTCATGATAAACAGACTATCTTGTT
TATTGATGAAATTCATAGATTTAATAAAGCTCAGCAAGATGCCTTATTACCTTATACAGAATCAGGTTTAATTACTTTCA
TTGGGGCAACTACAGAAAATCCCTCTTTTGAGGTTAATCCAGCGTTATTATCACGGGCGCAAGTTTATGTTTTAAAACCG
TTATCGGAGCAGGAGTTAAAACTCTTATTTCTTAGGGCTAAGCAAAGAGCGTTATCTTCTCTGCAATTTACCGAGGAAGC
CATGGATTTTTTAATTTCTTGTGCTGATGGAGATGCCAGACGATTACTCAATTTACTTGAGCAAACAAAAACAGCCTGCC
TAACAATTAAAACAGCAGTTGTTGATGTAGAGCTTTTACATAATGTGATAGTACAAAGTGGTCGACGTTTTGATAAAGGT
GGAGAAGCGTTTTACGATCAGATTTCTGCTTTACATAAGTCGGTACGAGGCTCTAATCCTGATGCGGCATTATATTGGCT
ATGTCGAATGCTGGATGGTGGTGTGGATCCATATTATTTAGCCAGACGTATTATTAGAATGTCATGGGAAGACATTGGGT
TAGCAGATCCGAAAGCAATTCAAATCGCTAATGATGCTGCTGCAACTTATGAGAGGCTTGGCTCACCCGAGGGCGAGCTT
GCTTTGGCACAAGCTGTAATTTATTTGTCTGTTGCTGCCAAGAGCAATGCGGGATATGTCGCATTTAATCAAGCCATGGA
ATTTATAAAAAGAGACAAGTCCAGAGAAGTACCCATTCACTTGAGAAACGCTCCCACTCAATTAATGAAAAAACTAGGTT
ATGGTCATGAATATCGATATGCTCATGATGAACCACACGGCTATGCGGCTGGTGAATGTTATTTACCTGAAGGAATGCCA
GAAGTAAATTGGTATAACCCGGTACAAAGAGGTTTAGAAACTAAAATTGCAGAAAAGCTCGCTTTTCTGCGCCAATTAGA
TAAAGATATGAAAAAGAAAGTTTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (49-158)

• AAA C-terminal domain (AAA_assoc_2) (180-256)

• MgsA AAA+ ATPase C terminal (MgsA_C) (257-421)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	37.558	100	0.376