Detailed information NTG0436773

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: INP93_RS08570
• Genome accession: NZ_CP063121
• Coordinates: 1754105..1755445 (-)
• Length: 446 a.a.
• NCBI ID: WP_197544672.1
• Uniprot ID: -
• Organism: Haemophilus parainfluenzae strain M1C130_2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1749105..1760445

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
INP93_RS08550 (INP93_08545)	potA	1750081..1751199 (+)	1119	WP_005698520.1	spermidine/putrescine ABC transporter ATP-binding protein PotA	-
INP93_RS08555 (INP93_08550)	potB	1751183..1752043 (+)	861	WP_197544671.1	spermidine/putrescine ABC transporter permease PotB	-
INP93_RS08560 (INP93_08555)	potC	1752043..1752813 (+)	771	WP_005695832.1	spermidine/putrescine ABC transporter permease PotC	-
INP93_RS08565 (INP93_08560)	-	1752948..1754030 (+)	1083	WP_005698550.1	extracellular solute-binding protein	-
INP93_RS08570 (INP93_08565)	rarA	1754105..1755445 (-)	1341	WP_197544672.1	replication-associated recombination protein A	Machinery gene
INP93_RS08575 (INP93_08570)	lolA	1755499..1756125 (-)	627	WP_197544673.1	outer membrane lipoprotein chaperone LolA	-
INP93_RS08580 (INP93_08575)	-	1756162..1758951 (-)	2790	WP_197544674.1	DNA translocase FtsK	-
INP93_RS08585 (INP93_08580)	lrp	1758954..1759433 (-)	480	WP_005695827.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50225.04 Da
• Isoelectric Point: 6.6711

>NTDB_id=436773 INP93_RS08570 WP_197544672.1 1754105..1755445(-) (rarA) [Haemophilus parainfluenzae strain M1C130_2]
MSNLNFDFAENDFRPLAARMRPTNLEQYYGQTHLIGEGKPLRKAIQAGHVHSMILWGPPGTGKTTLAEIIAHRINAEVER
ISAVTSGVKEIRESIERAKQNRLADRQTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
LLKSLTVTEIEQVLKQAISDPERGLGKERLVLEENLLQVLAEYVNGDARLALNCLELMVDMAPETENGKKLDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSIRGSAADAALYWYARIITAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYNAFNAAKQHAKDFPDFDVPPHLRNAPTALMKELGYGAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLQEQDKNASKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=436773 INP93_RS08570 WP_197544672.1 1754105..1755445(-) (rarA) [Haemophilus parainfluenzae strain M1C130_2]
ATGTCTAATCTTAATTTTGATTTTGCTGAAAATGACTTTCGCCCTTTAGCTGCCCGTATGCGTCCAACTAATTTGGAGCA
ATATTATGGGCAGACGCATTTAATTGGGGAAGGAAAGCCGCTTCGTAAAGCAATTCAAGCAGGGCATGTTCATTCTATGA
TTCTGTGGGGGCCGCCGGGTACAGGTAAAACAACACTGGCGGAAATTATTGCTCATCGTATCAATGCAGAAGTTGAACGA
ATTTCCGCGGTAACAAGCGGCGTGAAAGAAATTCGAGAATCAATTGAGCGTGCGAAACAAAATCGACTTGCAGATCGCCA
AACGATTTTATTTGTGGATGAAGTGCATCGCTTTAATAAAAGCCAACAAGATGCGTTTTTACCCCATATTGAAGATGGGA
CGATTATTTTTATTGGTGCGACAACGGAAAATCCTTCCTTTGAATTAAATAATGCATTGCTTTCTCGTGCGAGAGTTTAT
CTACTCAAGTCATTGACAGTTACTGAAATCGAACAAGTTCTAAAACAGGCGATTTCTGATCCTGAGCGAGGATTAGGTAA
AGAGCGGTTAGTTTTAGAAGAGAATTTACTACAAGTATTAGCCGAATATGTGAATGGTGATGCTCGCCTGGCTTTAAACT
GCCTTGAATTGATGGTGGATATGGCTCCTGAAACAGAAAACGGTAAAAAATTAGACCGCACTTTGTTGAAAGAAGTATTA
GGTGAACGACAAGCGCGTTTTGATAAACAAGGTGATCGCTTCTATGATTTGATTTCCGCTTTACATAAATCCATTCGAGG
CTCCGCAGCAGATGCTGCGCTTTACTGGTATGCGCGAATTATCACTGCAGGCGGCGATCCTCTTTATGTTGCTCGACGTT
TATTAGCGATAGCTTCAGAAGATGTGGGTAATGCGGATCCTAGAGCAATGCAAGTGGCTCTAGCGGCTTGGGATTGTTTT
ACGAGAGTGGGCGCTTATGAAGGAGAGCGAGCTATTGCGCAAGCTATTATTTATTTAGCCGTAGCACCGAAAAGTAATGC
CGTTTACAACGCATTTAATGCAGCCAAACAACATGCAAAAGATTTTCCTGATTTTGATGTACCGCCTCATTTACGTAATG
CGCCAACGGCTTTAATGAAAGAATTAGGCTATGGTGCTGAATATCGTTATGCACATGATGAGCCAAATGCTTATGCCGCA
GGAGAAAATTACTTTCCACCGGAACTGAAAGATACCCAGTATTATTTCCCAACTAATCGAGGGATGGAAATTCAAATTAA
AGAAAAACTTGAACGTTTACAAGAGCAAGATAAAAACGCATCAAAAAAACGCTATAAATAG

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• AAA C-terminal domain (AAA_assoc_2) (187-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.141	95.516	0.383