Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GRB95_RS06390 Genome accession   NZ_CP051004
Coordinates   1228150..1229904 (-) Length   584 a.a.
NCBI ID   WP_000851083.1    Uniprot ID   A0AAW6XX15
Organism   Streptococcus agalactiae 515     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1223150..1234904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRB95_RS06365 (GRB95_06365) mvaD 1223579..1224523 (-) 945 WP_000348826.1 diphosphomevalonate decarboxylase -
  GRB95_RS06370 (GRB95_06370) mvk 1224505..1225383 (-) 879 WP_000659719.1 mevalonate kinase -
  GRB95_RS06375 (GRB95_06375) - 1225499..1226728 (-) 1230 WP_000489520.1 HAMP domain-containing sensor histidine kinase -
  GRB95_RS06380 (GRB95_06380) - 1226728..1227414 (-) 687 WP_001264422.1 response regulator transcription factor -
  GRB95_RS06385 (GRB95_06385) - 1227416..1228042 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  GRB95_RS06390 (GRB95_06390) rcrQ 1228150..1229904 (-) 1755 WP_000851083.1 ABC transporter ATP-binding protein Regulator
  GRB95_RS06395 (GRB95_06395) rcrP 1229894..1231711 (-) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  GRB95_RS06400 (GRB95_06400) - 1231758..1232198 (-) 441 WP_000431168.1 MarR family transcriptional regulator -
  GRB95_RS06405 (GRB95_06405) - 1232467..1234539 (+) 2073 WP_017645599.1 bifunctional metallophosphatase/5'-nucleotidase -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64537.93 Da        Isoelectric Point: 7.4058

>NTDB_id=435912 GRB95_RS06390 WP_000851083.1 1228150..1229904(-) (rcrQ) [Streptococcus agalactiae 515]
MKTKSQKTSFFSNLSPYLKGYKLLFALAIVLATLSSLTTVIGPDRLKEMTDLMVKGLAGNIDLAKIGHIAGQLAVLYVLG
ALVSYLASFIVTTIIQKFAQGMRNAIADKINKIPLSYFDSHTQGDTLSRVTNDVDLMTQSFNQSLVTMVASTVLLIGSLI
MMFKTDWHLATTAIISVFSGFALSSIIMVKSQPLFKKQQMNLANISGYVEEIYSGHNIVTSHNARQQAKSDFQLLNDKLH
SSMWKSQFFSGIMMPLMQFIGNFGYVMVCVVGAMLAIKGTITMGTIVAFMTYVRIFTQPIGQIAQGITQLQSASAAMGRV
FEFLNETNMQEDKHKVLNLPKFKGYVSFEHVKFGYSDNKTIIHDFTSEAQPGQKVAIVGPTGAGKTTIVNLLMRFYDVNS
GSISIDDINIQDMKRSQVHDAFSMVLQDIWLFEGTIKENLIFNQTTISDDEVQEAAKAVGVHHFIMTLPKGYDIVLDDAV
TLSVGQKQLLTIARALLKNSPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKDGNIIEQ
GSHDVLMSQSGFYADLYNSQFESA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=435912 GRB95_RS06390 WP_000851083.1 1228150..1229904(-) (rcrQ) [Streptococcus agalactiae 515]
ATGAAAACTAAATCACAAAAAACGTCTTTTTTCTCTAATTTGTCTCCGTACCTCAAAGGTTACAAACTTCTTTTTGCGTT
AGCAATTGTGTTAGCAACTTTATCAAGCTTGACAACAGTTATAGGACCAGACCGTCTTAAAGAGATGACGGATCTTATGG
TAAAAGGCTTGGCTGGTAATATTGACTTAGCCAAAATCGGTCATATTGCAGGGCAATTGGCAGTATTATATGTTTTAGGT
GCATTAGTATCCTATCTAGCAAGTTTTATTGTAACGACTATTATTCAAAAATTTGCTCAAGGCATGCGCAATGCTATTGC
TGATAAAATCAATAAAATACCTTTGAGTTATTTTGATAGCCATACTCAAGGTGATACTTTATCTCGTGTTACAAATGATG
TGGATTTGATGACACAGTCTTTTAACCAAAGTTTAGTTACTATGGTTGCATCTACAGTATTATTGATTGGTTCATTAATT
ATGATGTTCAAAACAGATTGGCATTTAGCAACAACGGCGATTATATCGGTATTTTCAGGATTCGCTCTTTCTTCAATCAT
TATGGTGAAGAGTCAGCCTTTATTTAAAAAGCAACAGATGAATTTGGCTAATATATCTGGATATGTAGAAGAAATTTACT
CAGGACATAACATTGTTACTAGTCATAACGCAAGACAGCAGGCTAAGTCAGATTTTCAACTATTAAATGATAAACTTCAC
AGTTCCATGTGGAAATCACAATTTTTCTCTGGAATTATGATGCCTCTGATGCAGTTTATTGGTAATTTTGGTTATGTGAT
GGTGTGTGTGGTTGGTGCCATGTTAGCTATCAAAGGAACAATTACTATGGGTACAATTGTTGCTTTTATGACCTATGTTC
GTATTTTTACACAGCCTATTGGTCAGATTGCTCAAGGAATTACACAATTACAGTCTGCTAGTGCAGCCATGGGACGTGTT
TTTGAATTTTTAAATGAAACAAATATGCAAGAGGATAAGCACAAAGTGTTAAATCTTCCTAAGTTTAAGGGGTATGTGTC
CTTTGAACATGTCAAGTTTGGTTATAGTGATAACAAGACTATTATTCATGACTTTACTTCGGAGGCACAGCCTGGTCAGA
AAGTTGCTATTGTAGGACCAACTGGCGCAGGTAAAACGACAATTGTTAATTTATTGATGCGTTTTTATGATGTTAATTCA
GGTAGTATTTCCATAGATGACATCAATATCCAAGACATGAAACGTAGTCAAGTTCATGATGCTTTCTCGATGGTTCTTCA
AGATATATGGTTGTTTGAGGGAACTATTAAAGAAAATTTGATTTTTAATCAGACGACAATCAGTGACGATGAGGTTCAAG
AAGCTGCTAAGGCAGTCGGTGTACATCATTTTATAATGACACTACCTAAAGGGTATGATATTGTCCTTGATGACGCTGTG
ACATTGTCAGTTGGACAAAAGCAATTATTAACCATTGCTCGAGCTCTTTTGAAAAATTCTCCCTTACTTATCTTAGATGA
AGCAACTTCATCTGTTGATACACGTACAGAAGAGTTAATTCAAAAAGCTATGGACAAACTTATGGAAGGAAGAACATCAT
TTGTTATCGCACATCGTTTATCAACGATTAAAAACGCAGATTTGATTTTGGTCATGAAAGATGGGAATATCATTGAGCAA
GGCAGTCATGATGTTTTGATGTCTCAAAGTGGTTTTTATGCTGATCTGTATAATTCTCAATTCGAATCAGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(26-299)

ABC transporter (ABC_tran)

(364-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

76.125

98.973

0.753