Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SMUGS5_RS04820 Genome accession   NC_018089
Coordinates   1005451..1007196 (-) Length   581 a.a.
NCBI ID   WP_014834968.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1000451..1012196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS04800 (SMUGS5_04740) - 1001645..1002331 (+) 687 WP_002273952.1 phosphopantothenate--cysteine ligase -
  SMUGS5_RS04805 (SMUGS5_04745) coaC 1002324..1002863 (+) 540 WP_002264265.1 phosphopantothenoylcysteine decarboxylase -
  SMUGS5_RS04810 (SMUGS5_04750) - 1002938..1003510 (+) 573 WP_002262264.1 ECF transporter S component -
  SMUGS5_RS04815 (SMUGS5_04755) - 1003605..1005320 (+) 1716 WP_014834967.1 phospho-sugar mutase -
  SMUGS5_RS04820 (SMUGS5_04760) rcrQ 1005451..1007196 (-) 1746 WP_014834968.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04825 (SMUGS5_04765) - 1007193..1008926 (-) 1734 WP_014834969.1 ABC transporter ATP-binding protein -
  SMUGS5_RS04830 (SMUGS5_04770) - 1008936..1009535 (-) 600 WP_080047968.1 lysozyme family protein -
  SMUGS5_RS04835 (SMUGS5_04775) - 1009551..1010528 (-) 978 WP_002262259.1 nucleoid-associated protein -
  SMUGS5_RS04840 (SMUGS5_04780) glyA 1010525..1011787 (-) 1263 WP_014834971.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65318.99 Da        Isoelectric Point: 9.5861

>NTDB_id=43528 SMUGS5_RS04820 WP_014834968.1 1005451..1007196(-) (rcrQ) [Streptococcus mutans GS-5]
MKARNNKNTLKRLTADFLKQRILVFLALLGTLIQVSLTVYLPVLIGRAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLIYNRLVFTYSQKLRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMARL
DFFMMVLVLALTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAITFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYSEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=43528 SMUGS5_RS04820 WP_014834968.1 1005451..1007196(-) (rcrQ) [Streptococcus mutans GS-5]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGACTGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCGAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGATTTACAATCGTTTGGTTTTCACTTATAGCCAGAAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTGACTATTTTGTTAACCATCATAACAATGGCAAGATTA
GACTTTTTTATGATGGTTTTGGTACTGGCCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGAGCATTTACTCAACATATTGAAGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGTTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGG
GCTATTTTCTATTCATCTACAGTCAACCCTGCGACTCGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTTGAT
GAAAAGGATGCCAAAGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTACCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAGGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATTCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAACTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.737

100

0.391

Multiple sequence alignment