Detailed information NTG0434137

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: HCU65_RS13685
• Genome accession: NZ_CP050705
• Coordinates: 2748682..2751075 (-)
• Length: 797 a.a.
• NCBI ID: WP_219946409.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain PENSV20
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2743682..2756075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HCU65_RS13650 (HCU65_13685)	-	2744739..2745467 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
HCU65_RS13655 (HCU65_13690)	-	2745490..2746317 (+)	828	WP_373565604.1	transporter substrate-binding domain-containing protein	-
HCU65_RS13660 (HCU65_13695)	-	2746379..2747029 (+)	651	WP_003325317.1	amino acid ABC transporter permease	-
HCU65_RS13665 (HCU65_13700)	-	2747048..2747704 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
HCU65_RS13670 (HCU65_13705)	-	2747742..2747873 (-)	132	WP_003325315.1	YrzQ family protein	-
HCU65_RS13675 (HCU65_13710)	-	2747898..2748089 (-)	192	WP_003325314.1	hypothetical protein	-
HCU65_RS13680 (HCU65_13715)	-	2748102..2748566 (-)	465	WP_061572696.1	PRC-barrel domain-containing protein	-
HCU65_RS13685 (HCU65_13720)	recD2	2748682..2751075 (-)	2394	WP_219946409.1	ATP-dependent RecD-like DNA helicase	Machinery gene
HCU65_RS13690 (HCU65_13725)	-	2751109..2751729 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
HCU65_RS13695 (HCU65_13730)	mnmA	2751820..2752935 (-)	1116	WP_106270876.1	tRNA 2-thiouridine(34) synthase MnmA	-
HCU65_RS13700 (HCU65_13735)	-	2752969..2754111 (-)	1143	WP_219946410.1	cysteine desulfurase family protein	-
HCU65_RS13705 (HCU65_13740)	cymR	2754130..2754546 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
HCU65_RS13710 (HCU65_13745)	-	2754748..2756016 (+)	1269	WP_219946411.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89205.87 Da
• Isoelectric Point: 5.1233

>NTDB_id=434137 HCU65_RS13685 WP_219946409.1 2748682..2751075(-) (recD2) [Bacillus atrophaeus strain PENSV20]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSVETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=434137 HCU65_RS13685 WP_219946409.1 2748682..2751075(-) (recD2) [Bacillus atrophaeus strain PENSV20]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCAGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCGTTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCCATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCGTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATTGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGACCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTCCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CTGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTTGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCACAGGTCATTCC
GACAGTCAGGCTGACGGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCATGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCGCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACACCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	92.095	100	0.921