Detailed information NTG0432623

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: HB368_RS10525
• Genome accession: NZ_CP050425
• Coordinates: 2171198..2171899 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain PM194188
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2166198..2176899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HB368_RS10495 (HB368_10495)	-	2166505..2166948 (-)	444	WP_001246675.1	SRPBCC family protein	-
HB368_RS10500 (HB368_10500)	tadA	2167018..2167521 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
HB368_RS10505 (HB368_10505)	-	2167528..2168652 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
HB368_RS10510 (HB368_10510)	ung	2168649..2169362 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
HB368_RS10515 (HB368_10515)	-	2169413..2170009 (-)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
HB368_RS10520 (HB368_10520)	gspK	2170239..2171198 (-)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
HB368_RS10525 (HB368_10525)	xcpW	2171198..2171899 (-)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
HB368_RS10530 (HB368_10530)	xcpV	2171899..2172279 (-)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
HB368_RS10535 (HB368_10535)	-	2172269..2172823 (-)	555	WP_000841372.1	type II secretion system protein	-
HB368_RS10540 (HB368_10540)	-	2172833..2173441 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
HB368_RS10545 (HB368_10545)	-	2173479..2174252 (-)	774	WP_000497301.1	TatD family hydrolase	-
HB368_RS10550 (HB368_10550)	-	2174270..2174611 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
HB368_RS10555 (HB368_10555)	-	2174623..2175603 (-)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
HB368_RS10560 (HB368_10560)	kdsB	2175615..2176376 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=432623 HB368_RS10525 WP_000594588.1 2171198..2171899(-) (xcpW) [Acinetobacter baumannii strain PM194188]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=432623 HB368_RS10525 WP_000594588.1 2171198..2171899(-) (xcpW) [Acinetobacter baumannii strain PM194188]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATACCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991