Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnK   Type   Regulator
Locus tag   HB753_RS04035 Genome accession   NZ_CP050270
Coordinates   796016..797323 (+) Length   435 a.a.
NCBI ID   WP_002270206.1    Uniprot ID   -
Organism   Streptococcus mutans strain S4     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 791016..802323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB753_RS04005 (HB753_04005) - 791023..791256 (+) 234 WP_002262193.1 DUF1858 domain-containing protein -
  HB753_RS04010 (HB753_04010) - 791256..792620 (+) 1365 WP_032526261.1 DUF438 domain-containing protein -
  HB753_RS04015 (HB753_04015) - 792747..793474 (-) 728 Protein_779 ABC transporter permease -
  HB753_RS04020 (HB753_04020) - 793471..794211 (-) 741 WP_002265501.1 ABC transporter permease -
  HB753_RS04025 (HB753_04025) - 794211..795119 (-) 909 WP_002283587.1 ABC transporter ATP-binding protein -
  HB753_RS04030 (HB753_04030) scnR 795326..796015 (+) 690 WP_002288095.1 response regulator transcription factor Regulator
  HB753_RS04035 (HB753_04035) scnK 796016..797323 (+) 1308 WP_002270206.1 sensor histidine kinase Regulator
  HB753_RS04040 (HB753_04040) truB 797416..798297 (+) 882 WP_019804787.1 tRNA pseudouridine(55) synthase TruB -
  HB753_RS04045 (HB753_04045) - 798328..799248 (+) 921 WP_002262201.1 bifunctional riboflavin kinase/FAD synthetase -
  HB753_RS04050 (HB753_04050) spx 799309..799722 (+) 414 WP_002263835.1 transcriptional regulator Spx -
  HB753_RS04055 (HB753_04055) - 799715..799993 (+) 279 WP_002266791.1 UPF0223 family protein -
  HB753_RS04060 (HB753_04060) - 799983..800741 (+) 759 WP_019318294.1 inositol monophosphatase family protein -
  HB753_RS04065 (HB753_04065) - 800805..802109 (+) 1305 WP_019804786.1 RsmF rRNA methyltransferase first C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 435 a.a.        Molecular weight: 50059.02 Da        Isoelectric Point: 9.6900

>NTDB_id=431049 HB753_RS04035 WP_002270206.1 796016..797323(+) (scnK) [Streptococcus mutans strain S4]
MDTVKFFTKLLTKYVLLVFALIVGVIFVYGLVFLTYLNYYGKEKPELVYTKIAQSSQQDAFNISKRSQKEMDKQKTWAMV
LNQDGQIVQSYRLPQQLKRHYTNADMVKFSRWYLDDYPVFSYVRGQQILVFGYPKKYSLAKFNFYLNTQFIKNFLHLGFV
FLGIIFLFIFVLFSRSKLRIKKEIEPIVSALTFLSQGQSAALNEKGNLSEIKTALNETSHILEESNMMKEQWIRGVSHDL
RNPLMLISGYTSQLEQQYGHGKQTEQIENQIQNMKEMISNLNLSYLLDNQKRHSKFSSLDLAVVLRSVIADILNNYETVI
LHFDLPAEAVLVKGDATLLERAFRNLLLNSIRHSGSNQIDLTYQLFDNKVIIIIADKGTITAQKIVELNQKSTNYESHGM
GTVITKQIIKLHQGETVFSDNHPGLKVTIVLPCNG

Nucleotide


Download         Length: 1308 bp        

>NTDB_id=431049 HB753_RS04035 WP_002270206.1 796016..797323(+) (scnK) [Streptococcus mutans strain S4]
ATGGATACCGTTAAATTTTTTACGAAGTTATTGACCAAGTATGTTCTATTAGTATTTGCCTTAATTGTAGGAGTTATTTT
TGTTTATGGCTTGGTTTTCTTAACCTATCTTAATTATTATGGAAAGGAAAAACCAGAGCTAGTTTACACCAAAATCGCTC
AATCGAGTCAACAAGATGCGTTCAATATTAGTAAAAGAAGTCAAAAAGAAATGGATAAACAAAAGACTTGGGCCATGGTA
TTAAATCAAGATGGTCAGATCGTCCAATCTTATCGTTTACCTCAACAGCTCAAAAGACATTATACCAATGCTGATATGGT
GAAATTTTCGCGCTGGTATTTAGATGATTATCCTGTTTTTTCCTATGTACGTGGTCAGCAGATTTTAGTTTTTGGCTACC
CTAAAAAGTATTCCCTAGCAAAGTTTAATTTTTATCTGAATACGCAATTTATTAAGAATTTTCTTCATTTAGGGTTTGTT
TTCTTAGGCATCATCTTTTTATTTATCTTTGTTCTTTTTAGCCGTTCAAAGCTGCGCATTAAAAAGGAAATAGAGCCGAT
TGTCTCTGCGCTCACTTTCTTGTCGCAAGGTCAAAGTGCTGCTCTTAATGAAAAAGGCAATCTTTCTGAAATTAAGACAG
CTCTCAATGAAACTTCTCATATTTTAGAAGAAAGTAATATGATGAAAGAACAGTGGATTAGAGGAGTCAGTCACGATTTG
CGCAACCCGCTGATGCTGATTTCAGGCTACACCAGTCAATTGGAACAACAATATGGTCATGGAAAGCAAACGGAGCAGAT
TGAAAATCAGATTCAAAATATGAAAGAAATGATTTCTAATCTCAATTTGAGCTACCTGTTGGATAATCAAAAGCGTCATT
CCAAATTTTCAAGCCTTGATTTAGCTGTTGTTCTGCGATCCGTAATTGCTGATATTCTAAATAATTATGAAACAGTTATA
CTTCATTTTGATTTACCTGCAGAGGCGGTATTGGTAAAGGGTGATGCCACTTTATTAGAAAGGGCTTTTAGAAATCTTCT
GCTCAATAGTATTAGGCATAGTGGCTCTAATCAGATCGATTTGACTTATCAATTATTTGATAATAAAGTGATTATTATCA
TTGCAGATAAGGGAACTATTACAGCTCAGAAAATTGTAGAACTAAATCAAAAATCAACTAATTATGAGTCGCATGGCATG
GGCACCGTTATCACTAAGCAAATCATAAAACTTCATCAAGGTGAGACTGTCTTTTCAGATAATCATCCAGGTTTGAAAGT
GACGATTGTTTTGCCCTGTAACGGATGA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(228-282)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(334-432)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnK Streptococcus mutans UA159

98.845

99.54

0.984