Detailed information NTG0042893

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: GTCCBUS3UF5_RS13150
• Genome accession: NC_016593
• Coordinates: 2634481..2636841 (-)
• Length: 786 a.a.
• NCBI ID: WP_025039107.1
• Uniprot ID: -
• Organism: Geobacillus thermoleovorans CCB_US3_UF5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2629481..2641841

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTCCBUS3UF5_RS13130 (GTCCBUS3UF5_28790)	alaS	2629494..2632130 (-)	2637	WP_014196399.1	alanine--tRNA ligase	-
GTCCBUS3UF5_RS13135 (GTCCBUS3UF5_28810)	-	2632449..2633510 (-)	1062	WP_014196400.1	AI-2E family transporter	-
GTCCBUS3UF5_RS18620 (GTCCBUS3UF5_28820)	-	2633629..2633763 (-)	135	WP_013144658.1	YrzQ family protein	-
GTCCBUS3UF5_RS13140 (GTCCBUS3UF5_28830)	-	2633775..2633966 (-)	192	WP_008881018.1	hypothetical protein	-
GTCCBUS3UF5_RS13145 (GTCCBUS3UF5_28840)	-	2633982..2634455 (-)	474	WP_014196401.1	PRC-barrel domain-containing protein	-
GTCCBUS3UF5_RS13150 (GTCCBUS3UF5_28850)	recD2	2634481..2636841 (-)	2361	WP_025039107.1	ATP-dependent RecD-like DNA helicase	Machinery gene
GTCCBUS3UF5_RS13155 (GTCCBUS3UF5_28860)	-	2636861..2637523 (-)	663	WP_011232039.1	tetratricopeptide repeat protein	-
GTCCBUS3UF5_RS13160 (GTCCBUS3UF5_28870)	mnmA	2637614..2638729 (-)	1116	WP_011232040.1	tRNA 2-thiouridine(34) synthase MnmA	-
GTCCBUS3UF5_RS13165 (GTCCBUS3UF5_28880)	-	2638744..2639886 (-)	1143	WP_014196403.1	cysteine desulfurase family protein	-
GTCCBUS3UF5_RS13170 (GTCCBUS3UF5_28890)	cymR	2639914..2640330 (-)	417	WP_011232042.1	cysteine metabolism transcriptional regulator CymR	-
GTCCBUS3UF5_RS13175 (GTCCBUS3UF5_28900)	-	2640350..2640574 (-)	225	WP_011232043.1	hypothetical protein	-

Sequence

Protein

• Length: 786 a.a.
• Molecular weight: 86537.16 Da
• Isoelectric Point: 5.0447

>NTDB_id=42893 GTCCBUS3UF5_RS13150 WP_025039107.1 2634481..2636841(-) (recD2) [Geobacillus thermoleovorans CCB_US3_UF5]
MQEQQILALDGRTFIKGVCLAVIFHNEETLYTVVRVRVEETNEAPVEEEVVVTGYFPRLNEGDVYIFYGQFRQHPRFGRQ
YAASQFRKQLPNTKEGVIHYLSSGLFKGIGKKTAAAIVETLGENAIAAILRDPRALERVPKLTKKKAKQLYDALRAHEGL
EQTMIALAQLGFGPQLAMKIYQAYGEEAVDIIHENPYQLVEDIEGIGFGRADEIGRQLGISGSHPARLRAASLFVLEQAC
LQEGHVYLREEELMERVGELLDGRLSGAVDGRAISQTLLMLSEEGKLIAEQGRYYLPSLYFAEKGIVSNIKRLLGQTPPS
AFAESEFLLALGALEERLGMQYAPQQREAIQQALSSPLFILTGGPGTGKTTVIKGIVELFAALNGLSLDPADYKQGEPFP
VLLAAPTGRAAKRMSEATGLPAATIHRLLGWNGAEGFSRDENEPISGKLLVIDEMSMVDTWLANQLLKAVPNGMQVIFVG
DEDQLPSVGPGQVLKDLLSSGVIPFARLTEVYRQAEGSSIIELAHEMKRGVVPDDLTAPKADRSFIRCRAGQVVDVVRQI
ADNARKKGFSVKDIQVLAPMYRGPAGIDQLNKALQELFNPPAEGKRELSVGEVVYRVGDKVLQLVNQPEDNVFNGDIGEI
VAIFYAKENIEKQDLLVVSFDGIEVTYTRQDLGQITHAYCCSVHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSKQ
FLVLCGEEEAFRFGVAKQSDGARQTALAEKLAGAAAPFVEVELPFEEANMGMENVTPYDFMGDEPS

Nucleotide

• Length: 2361 bp

>NTDB_id=42893 GTCCBUS3UF5_RS13150 WP_025039107.1 2634481..2636841(-) (recD2) [Geobacillus thermoleovorans CCB_US3_UF5]
TTGCAAGAGCAACAAATCCTCGCCCTTGACGGACGCACGTTCATTAAAGGAGTGTGCTTGGCGGTCATTTTTCATAATGA
GGAAACATTGTACACGGTCGTCCGCGTGCGCGTTGAGGAAACGAACGAAGCGCCCGTTGAGGAGGAAGTCGTCGTCACCG
GCTATTTTCCGCGTTTAAACGAAGGGGACGTCTACATCTTTTACGGACAATTCCGCCAACATCCGCGTTTTGGCCGCCAA
TATGCGGCTAGTCAGTTCCGCAAACAGCTTCCGAACACGAAAGAAGGAGTCATTCATTATTTATCGAGCGGTTTGTTTAA
AGGAATCGGCAAAAAAACGGCTGCGGCGATTGTCGAGACGCTCGGCGAAAACGCGATCGCCGCGATTTTGCGCGACCCCA
GGGCGCTAGAGCGTGTGCCGAAGCTGACGAAAAAAAAGGCGAAGCAGCTGTACGATGCGCTTCGCGCCCACGAAGGGCTT
GAGCAAACGATGATCGCCCTCGCCCAGCTCGGTTTTGGCCCGCAGCTGGCCATGAAAATTTACCAAGCGTATGGCGAAGA
AGCGGTTGACATCATCCACGAGAACCCGTACCAGCTCGTTGAGGATATCGAAGGGATCGGCTTTGGCCGCGCTGATGAAA
TCGGGCGCCAGCTCGGCATTTCCGGCAGCCATCCGGCCCGGCTGCGCGCCGCCTCGTTGTTTGTTCTTGAACAGGCGTGC
TTGCAGGAAGGGCACGTTTATTTGCGCGAGGAAGAGCTGATGGAGCGCGTCGGGGAGCTGCTTGACGGAAGGCTGAGCGG
TGCGGTGGATGGACGAGCGATCAGCCAAACGCTTCTGATGTTAAGCGAAGAAGGGAAGCTGATCGCCGAGCAAGGGCGTT
ATTATCTCCCTTCCCTTTACTTCGCCGAGAAAGGGATCGTCTCCAACATTAAGCGGCTGCTCGGGCAGACGCCGCCGTCG
GCGTTTGCCGAGTCGGAGTTTTTGCTGGCGCTTGGGGCGCTTGAGGAACGGCTTGGCATGCAATATGCCCCCCAGCAAAG
GGAAGCGATCCAACAAGCGCTTTCTTCGCCGCTGTTTATTTTGACCGGCGGTCCGGGAACGGGGAAAACGACGGTCATCA
AAGGCATCGTCGAGCTGTTTGCCGCCCTAAACGGCCTGTCTCTTGACCCGGCTGACTACAAACAAGGCGAGCCGTTTCCG
GTGCTGCTGGCCGCACCGACCGGCCGAGCGGCGAAGCGGATGAGCGAGGCGACCGGGCTGCCGGCGGCGACGATCCACCG
CTTGCTTGGCTGGAATGGGGCGGAAGGGTTCAGCCGCGACGAGAACGAACCGATTTCCGGCAAGCTGCTTGTCATCGATG
AGATGTCGATGGTCGACACGTGGCTCGCCAACCAGCTGTTAAAAGCCGTGCCAAACGGCATGCAAGTCATTTTTGTCGGC
GATGAGGATCAATTGCCATCCGTCGGGCCAGGGCAAGTGCTGAAAGACTTGCTCTCTTCAGGCGTCATTCCGTTCGCTCG
GTTGACCGAGGTGTATCGCCAGGCGGAAGGATCATCGATCATCGAGCTTGCTCATGAGATGAAGCGCGGCGTCGTGCCGG
ACGATTTGACCGCTCCGAAGGCAGACCGTTCCTTCATCCGCTGCCGTGCGGGCCAGGTCGTCGATGTCGTGCGGCAAATC
GCGGACAACGCGCGCAAAAAAGGGTTTTCCGTCAAAGATATTCAAGTGCTCGCCCCGATGTACCGTGGTCCAGCGGGCAT
TGACCAATTGAACAAAGCGCTTCAAGAGCTGTTCAACCCGCCGGCTGAGGGGAAGCGGGAGCTGTCGGTCGGTGAGGTCG
TCTACCGCGTCGGCGATAAGGTGCTGCAGCTCGTCAATCAACCGGAAGACAATGTGTTTAACGGCGACATCGGCGAAATC
GTTGCCATTTTTTACGCCAAAGAAAATATCGAAAAGCAAGACTTGCTCGTCGTTTCGTTTGATGGCATTGAAGTGACGTA
CACACGGCAAGATTTAGGACAAATCACCCATGCGTACTGCTGTTCGGTTCATAAGGCGCAAGGAAGCGAGTTTCCAATCG
TCATTTTGCCCGTCGTCAAAAGCTATTACCGGATGTTGAAACGGAATTTGTTGTATACTGCGGTGACAAGAAGCAAGCAG
TTTCTCGTTTTATGCGGGGAAGAGGAAGCGTTTCGATTCGGCGTCGCAAAACAAAGCGACGGAGCGCGCCAGACGGCGCT
CGCTGAGAAGCTGGCGGGGGCGGCGGCGCCGTTTGTCGAGGTCGAACTGCCGTTTGAAGAGGCGAACATGGGGATGGAAA
ACGTTACGCCGTATGACTTTATGGGCGATGAGCCAAGCTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• Helix-hairpin-helix domain (HHH_5) (107-155)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (590-660)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-725)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	59.975	100	0.604