Detailed information NTG0428638

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G8D99_RS06050
• Genome accession: NZ_CP049916
• Coordinates: 1304569..1305288 (+)
• Length: 239 a.a.
• NCBI ID: WP_166323564.1
• Uniprot ID: A0A6G8S335
• Organism: Acinetobacter lanii strain 185
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1299569..1310288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8D99_RS06015 (G8D99_06015)	kdsB	1299665..1300426 (+)	762	WP_166323550.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
G8D99_RS06020 (G8D99_06020)	-	1300469..1301452 (+)	984	WP_166323552.1	DNA polymerase III subunit delta'	-
G8D99_RS06025 (G8D99_06025)	-	1301477..1301821 (+)	345	WP_166323554.1	PilZ domain-containing protein	-
G8D99_RS06030 (G8D99_06030)	-	1301853..1302626 (+)	774	WP_166323556.1	TatD family hydrolase	-
G8D99_RS06035 (G8D99_06035)	-	1302675..1303289 (+)	615	WP_166323558.1	TetR/AcrR family transcriptional regulator	-
G8D99_RS06040 (G8D99_06040)	-	1303293..1303889 (+)	597	WP_166323560.1	type II secretion system protein	-
G8D99_RS15645	gspI	1304149..1304523 (+)	375	Protein_1164	type II secretion system minor pseudopilin GspI	-
G8D99_RS06050 (G8D99_06050)	xcpW	1304569..1305288 (+)	720	WP_166323564.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G8D99_RS06055 (G8D99_06055)	gspK	1305343..1306296 (+)	954	WP_166323566.1	type II secretion system minor pseudopilin GspK	-
G8D99_RS06060 (G8D99_06060)	-	1306457..1307053 (+)	597	WP_166323568.1	6-carboxytetrahydropterin synthase	-
G8D99_RS06065 (G8D99_06065)	ung	1307151..1307864 (+)	714	WP_166327577.1	uracil-DNA glycosylase	-
G8D99_RS06070 (G8D99_06070)	-	1307861..1308979 (+)	1119	WP_166323570.1	enoyl-CoA hydratase/isomerase family protein	-
G8D99_RS06075 (G8D99_06075)	tadA	1308986..1309528 (+)	543	WP_166323572.1	tRNA adenosine(34) deaminase TadA	-
G8D99_RS06080 (G8D99_06080)	-	1309636..1310070 (+)	435	WP_166323574.1	SRPBCC family protein	-

Sequence

Protein

• Length: 239 a.a.
• Molecular weight: 27102.99 Da
• Isoelectric Point: 8.3199

>NTDB_id=428638 G8D99_RS06050 WP_166323564.1 1304569..1305288(+) (xcpW) [Acinetobacter lanii strain 185]
MKQNLKNKAGLPFKTKVLGFTLVELLVAIAIFAVLSALGWKVFDYLIKVKDRNAMHEENLGQLQEAYLQVQRDALQIVPL
TAHVAGQIQPALLLNNQQLSFSKAGVTDPLKQGNSPFERIEYQYNAQDKKIYRLKYPNLNFNVSAQPLSSVLLSDVEQFQ
ITVLNPNALNQWPEASTDPNDLKTLQRLPKGIRMQFSVKDVEYEWIFSLLNTDFLQQDKTNHSTDADTPSVNDTVNKKN

Nucleotide

• Length: 720 bp

>NTDB_id=428638 G8D99_RS06050 WP_166323564.1 1304569..1305288(+) (xcpW) [Acinetobacter lanii strain 185]
ATGAAGCAAAACCTAAAAAATAAAGCCGGATTGCCATTTAAAACCAAAGTTCTGGGCTTTACGCTGGTAGAGTTATTGGT
GGCAATAGCGATCTTTGCGGTCTTGTCTGCATTGGGTTGGAAAGTCTTTGATTATCTAATCAAAGTCAAAGACCGTAATG
CCATGCATGAAGAAAATTTAGGTCAGTTGCAAGAGGCTTATCTGCAAGTACAACGGGATGCTTTGCAAATCGTACCGCTG
ACGGCTCATGTTGCAGGTCAGATACAGCCTGCGCTGTTACTGAATAATCAGCAACTCAGTTTTAGCAAAGCGGGTGTGAC
TGATCCACTGAAGCAGGGTAATTCACCTTTTGAGCGGATTGAGTATCAATACAACGCACAAGACAAAAAAATCTACCGAT
TGAAATATCCTAATTTAAACTTCAACGTTTCGGCTCAGCCCTTATCAAGTGTTTTGCTCAGCGATGTGGAGCAGTTTCAG
ATCACAGTATTGAATCCCAATGCATTGAATCAGTGGCCTGAAGCGAGCACAGATCCAAATGATCTTAAAACTTTACAGCG
CCTCCCCAAAGGGATTCGGATGCAGTTTTCGGTTAAAGATGTTGAATATGAGTGGATATTTAGTCTTTTAAACACGGATT
TTTTACAGCAGGATAAAACCAATCATTCGACAGACGCTGATACTCCATCAGTGAATGACACCGTGAATAAGAAGAATTAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (71-207)

• Prokaryotic N-terminal methylation motif (N_methyl) (18-38)

3D structure

• AlphaFold DB: A0A6G8S335

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	63	83.682	0.527