Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   G8D99_RS05265 Genome accession   NZ_CP049916
Coordinates   1141802..1142515 (-) Length   237 a.a.
NCBI ID   WP_166323286.1    Uniprot ID   A0A6G8S2X7
Organism   Acinetobacter lanii strain 185     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1136802..1147515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS05245 (G8D99_05245) - 1138183..1138977 (+) 795 WP_166323278.1 M48 family metallopeptidase -
  G8D99_RS05250 (G8D99_05250) - 1139116..1139421 (+) 306 WP_166323280.1 phosphoethanolamine transferase domain-containing protein -
  G8D99_RS05255 (G8D99_05255) - 1139564..1140331 (+) 768 WP_166323282.1 M48 family metalloprotease -
  G8D99_RS05260 (G8D99_05260) - 1140480..1141529 (-) 1050 WP_166323284.1 NADP(H)-dependent aldo-keto reductase -
  G8D99_RS05265 (G8D99_05265) crp 1141802..1142515 (-) 714 WP_166323286.1 cAMP-activated global transcriptional regulator CRP Regulator
  G8D99_RS05270 (G8D99_05270) - 1142666..1143118 (+) 453 WP_166323288.1 OsmC family protein -
  G8D99_RS05275 (G8D99_05275) - 1143243..1144070 (-) 828 WP_166323290.1 peptidoglycan DD-metalloendopeptidase family protein -
  G8D99_RS05280 (G8D99_05280) - 1144201..1144683 (-) 483 WP_166323292.1 rhodanese-like domain-containing protein -
  G8D99_RS05285 (G8D99_05285) epsC 1145125..1146030 (+) 906 WP_166323294.1 serine O-acetyltransferase EpsC -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 26520.20 Da        Isoelectric Point: 4.7412

>NTDB_id=428637 G8D99_RS05265 WP_166323286.1 1141802..1142515(-) (crp) [Acinetobacter lanii strain 185]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRFPKRTAIIDAGSESKSLYLILKGSVSIILREDDDREIVVAYLNPGDF
FGEMGLFETNPQRTAEVRTRDVCEIAEISYANFHEVSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEAVHAVEEDLDDVDDE

Nucleotide


Download         Length: 714 bp        

>NTDB_id=428637 G8D99_RS05265 WP_166323286.1 1141802..1142515(-) (crp) [Acinetobacter lanii strain 185]
ATGACTTCTAATTTTTCACAACTTAGTACAGATGCTTTGTCGCCAGGTCAACTGCCTGAATCGGTCAAAGCTTTGCTTAA
GCGTGCCCACATCAATCGCTTTCCAAAACGTACTGCTATCATTGATGCTGGCTCTGAGTCAAAATCACTGTATTTAATTT
TAAAAGGTTCGGTTTCAATTATTTTACGTGAAGATGATGACCGTGAAATTGTTGTTGCTTATTTGAACCCTGGGGACTTT
TTTGGGGAAATGGGTCTGTTTGAAACCAACCCACAGCGTACAGCGGAAGTTCGCACTCGTGATGTTTGCGAGATTGCTGA
AATTTCGTATGCCAATTTCCATGAAGTCAGCAAACAATATCCTGATTTGAGCTACGCTGTTTTCGCACAGTTGGTTCGCC
GTTTGAAAAACACCACACGTAAAGTGACTGACCTTGCATTTATCGATGTATCGGGTCGTATTGCGCGTTGTTTAATCGAC
CTTTCAAGTCAGCCTGAAGCAATGATTTTGCCAAATGGCCGTCAGATTCGTATCACTCGTCAAGAGATTGGTCGTATTGT
CGGTTGTTCACGTGAAATGGTCGGTCGTGTTCTAAAAACTCTTGAAGAACAAGGCATGATCGAAACTGATGGTAAAGCCA
TTTTGATTTTTGATGCGTCTTTAGAAGCAGTTCATGCTGTTGAAGAAGATCTTGATGATGTAGATGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8S2X7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.416

98.312

0.899
  crp Vibrio cholerae strain A1552

47.317

86.498

0.409
  crp Haemophilus influenzae Rd KW20

47.692

82.278

0.392