Detailed information NTG0427985

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G8E09_RS10635
• Genome accession: NZ_CP049806
• Coordinates: 2232918..2233733 (-)
• Length: 271 a.a.
• NCBI ID: WP_167563691.1
• Uniprot ID: A0A6H0FUU9
• Organism: Acinetobacter pittii strain A1254
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2227918..2238733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8E09_RS10605 (G8E09_10605)	-	2228226..2228666 (-)	441	WP_167563689.1	SRPBCC family protein	-
G8E09_RS10610 (G8E09_10610)	tadA	2228737..2229240 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
G8E09_RS10615 (G8E09_10615)	hibch	2229246..2230370 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
G8E09_RS10620 (G8E09_10620)	ung	2230367..2231080 (-)	714	WP_167563690.1	uracil-DNA glycosylase	-
G8E09_RS10625 (G8E09_10625)	-	2231134..2231730 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
G8E09_RS10630 (G8E09_10630)	gspK	2231958..2232917 (-)	960	WP_057085316.1	type II secretion system minor pseudopilin GspK	-
G8E09_RS10635 (G8E09_10635)	xcpW	2232918..2233733 (-)	816	WP_167563691.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G8E09_RS10640 (G8E09_10640)	xcpV	2233733..2234113 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
G8E09_RS10645 (G8E09_10645)	-	2234103..2234657 (-)	555	WP_002121405.1	type II secretion system protein	-
G8E09_RS10650 (G8E09_10650)	-	2234664..2235272 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
G8E09_RS10655 (G8E09_10655)	ycfH	2235309..2236082 (-)	774	WP_167563692.1	TatD family hydrolase	-
G8E09_RS10660 (G8E09_10660)	pilZ	2236100..2236441 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
G8E09_RS10665 (G8E09_10665)	holB	2236452..2237432 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
G8E09_RS10670 (G8E09_10670)	kdsB	2237446..2238207 (-)	762	WP_167563693.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30837.21 Da
• Isoelectric Point: 9.8156

>NTDB_id=427985 G8E09_RS10635 WP_167563691.1 2232918..2233733(-) (xcpW) [Acinetobacter pittii strain A1254]
MIKNKCSRYPSTASRLAARSEQMMRGYSEQSSSSCAQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRSALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIIVLTPQEVTKWPEVNIDPTKPDEFKKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=427985 G8E09_RS10635 WP_167563691.1 2232918..2233733(-) (xcpW) [Acinetobacter pittii strain A1254]
ATGATAAAGAATAAATGTTCTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTTCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATAGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAAGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

3D structure

• AlphaFold DB: A0A6H0FUU9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88	83.026	0.731