Detailed information NTG0427910

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: G8E00_RS09515
• Genome accession: NZ_CP049801
• Coordinates: 2123777..2124460 (-)
• Length: 227 a.a.
• NCBI ID: WP_166224053.1
• Uniprot ID: A0A6G8RWC1
• Organism: Acinetobacter shaoyimingii strain 323-1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2118777..2129460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G8E00_RS09485 (G8E00_09480)	-	2119067..2119501 (-)	435	WP_166224041.1	SRPBCC family protein	-
G8E00_RS09490 (G8E00_09485)	tadA	2119588..2120115 (-)	528	WP_166224043.1	tRNA adenosine(34) deaminase TadA	-
G8E00_RS09495 (G8E00_09490)	-	2120122..2121243 (-)	1122	WP_166009501.1	enoyl-CoA hydratase/isomerase family protein	-
G8E00_RS09500 (G8E00_09495)	ung	2121240..2121953 (-)	714	WP_166224046.1	uracil-DNA glycosylase	-
G8E00_RS09505 (G8E00_09500)	-	2121990..2122586 (-)	597	WP_166224050.1	6-carboxytetrahydropterin synthase	-
G8E00_RS09510 (G8E00_09505)	gspK	2122748..2123707 (-)	960	WP_166009495.1	type II secretion system minor pseudopilin GspK	-
G8E00_RS09515 (G8E00_09510)	xcpW	2123777..2124460 (-)	684	WP_166224053.1	type II secretion system minor pseudopilin GspJ	Machinery gene
G8E00_RS09520 (G8E00_09515)	gspI	2124463..2124831 (-)	369	Protein_1859	type II secretion system minor pseudopilin GspI	-
G8E00_RS09525 (G8E00_09520)	-	2125124..2125705 (-)	582	WP_166224056.1	type II secretion system protein	-
G8E00_RS09530 (G8E00_09525)	-	2125716..2126327 (-)	612	WP_166009486.1	TetR/AcrR family transcriptional regulator	-
G8E00_RS09535 (G8E00_09530)	-	2126372..2127148 (-)	777	WP_166009484.1	TatD family hydrolase	-
G8E00_RS09540 (G8E00_09535)	-	2127182..2127523 (-)	342	WP_166009482.1	PilZ domain-containing protein	-
G8E00_RS09545 (G8E00_09540)	-	2127551..2128531 (-)	981	WP_166009480.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
G8E00_RS09550 (G8E00_09545)	kdsB	2128547..2129311 (-)	765	WP_166224060.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 227 a.a.
• Molecular weight: 26034.67 Da
• Isoelectric Point: 8.3383

>NTDB_id=427910 G8E00_RS09515 WP_166224053.1 2123777..2124460(-) (xcpW) [Acinetobacter shaoyimingii strain 323-1]
MNDFKHSNKTLNNKNKHKTQELGFTLVELLVSIAIFAVLSALGWKVFDYLLKVRDRNAVHEEHLAALQDAYLQFQRDSLQ
IVPLTANIAGTVQPALVLNNQTLSFTKSGVSDPLQQGLSPYERIEYRYDTQQKKLYRLKYANINVSQTQQPVSSELLSNV
DQFEITVLNPDTLTQWPDVNTDVNNLQNLRVLPRGLRIKLTVQDVEYEWMMSLLNTQFLKAQAKQSN

Nucleotide

• Length: 684 bp

>NTDB_id=427910 G8E00_RS09515 WP_166224053.1 2123777..2124460(-) (xcpW) [Acinetobacter shaoyimingii strain 323-1]
GTGAATGATTTTAAACATAGCAATAAAACCCTAAACAATAAAAATAAGCACAAAACTCAAGAGCTCGGTTTTACCTTGGT
TGAGTTATTGGTCTCAATCGCAATATTTGCCGTGTTATCTGCTTTGGGTTGGAAGGTTTTTGATTATTTACTCAAGGTGA
GAGACCGTAATGCAGTTCATGAAGAACATTTGGCAGCATTACAAGATGCATATTTGCAATTTCAACGAGATAGTTTGCAA
ATTGTACCATTAACAGCAAACATTGCAGGAACGGTACAGCCTGCATTAGTGCTGAATAATCAGACTTTATCCTTTACCAA
GTCAGGTGTGTCTGATCCTTTGCAACAAGGCTTGTCACCCTATGAGCGCATAGAATACCGATACGATACACAGCAAAAGA
AACTTTATCGTTTAAAATATGCCAATATTAACGTCAGTCAAACACAGCAACCCGTATCAAGTGAATTATTGTCTAATGTA
GATCAATTTGAGATTACAGTGCTCAATCCTGACACATTAACTCAATGGCCAGATGTAAATACTGATGTGAATAATCTGCA
AAATTTACGAGTATTACCAAGGGGCTTAAGAATAAAGCTCACAGTACAAGATGTTGAATATGAATGGATGATGAGTTTGT
TAAATACACAATTCTTAAAAGCTCAAGCCAAACAATCTAATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (22-42)

• Type II secretion system (T2SS), protein J (T2SSJ) (74-206)

3D structure

• AlphaFold DB: A0A6G8RWC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	64.615	85.903	0.555