Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   G4P54_RS14110 Genome accession   NZ_CP048852
Coordinates   2638625..2640985 (-) Length   786 a.a.
NCBI ID   WP_167872987.1    Uniprot ID   A0A6H0WMU2
Organism   Bacillus tequilensis strain EA-CB0015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2633625..2645985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS14090 (G4P54_14045) - 2633704..2635257 (+) 1554 WP_167872986.1 SH3 domain-containing protein -
  G4P54_RS14095 (G4P54_14050) dtd 2635284..2635724 (-) 441 WP_024714893.1 D-aminoacyl-tRNA deacylase -
  G4P54_RS14100 (G4P54_14055) relA 2635737..2637938 (-) 2202 WP_024714892.1 GTP diphosphokinase -
  G4P54_RS14105 (G4P54_14060) - 2638107..2638619 (-) 513 WP_024714891.1 adenine phosphoribosyltransferase -
  G4P54_RS14110 (G4P54_14065) recJ 2638625..2640985 (-) 2361 WP_167872987.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  G4P54_RS14115 (G4P54_14070) - 2641052..2641375 (-) 324 WP_167872988.1 LapA family protein -
  G4P54_RS14120 (G4P54_14075) - 2641453..2641950 (-) 498 WP_167872989.1 cation:proton antiporter regulatory subunit -
  G4P54_RS14125 (G4P54_14080) secDF 2642105..2644318 (-) 2214 WP_167872990.1 protein translocase subunit SecDF -
  G4P54_RS14130 (G4P54_14085) comN 2644357..2644653 (-) 297 WP_019259048.1 post-transcriptional regulator ComN -

Sequence

Protein


Download         Length: 786 a.a.        Molecular weight: 88039.75 Da        Isoelectric Point: 5.0491

>NTDB_id=423580 G4P54_RS14110 WP_167872987.1 2638625..2640985(-) (recJ) [Bacillus tequilensis strain EA-CB0015]
MLASKMRWEIQRPDQDKVKSLTEQLHITPLVASLLVKRGFDTAESAKLFLHTKDADFYDPFEMKGMREAAERIKQAIAQQ
EQIMIYGDYDADGVTSTSVMLHTLQKLSAQVDFYIPDRFKEGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAKVAKEL
GLDVIITDHHEPGPELPDVHAIVHPKQPGCTYPFKELAGVGVAFKLAHALLGELPDELLDLAAIGTIADLVPLHDENRLI
ATLGLERLRRTNRLGLKELMKLSGGDIGEANEETVGFQLAPRLNAVGRIEQADPAVHLLMSEDSFEAEELAAEIDRLNKE
RQKMVSKMTDEAIEMVEQQGLEQTAIVVAKAGWNPGVVGIVASKLVDRFYRPAIVLGIDEERGIAKGSARSIRGFNLFES
LSECRDILPHFGGHPMAAGMTLNAADVPDLRNRLNEIADNTLTEEDFIPVQEVDLVCGVEDITVESITEMNMLSPFGMLN
PKPHVLVENAVLEDVRKIGANKNHVKMTVRNESSQLDCVGFNKGELEEGIVPGSRISIVGEMSINEWNNRKKPQLMIKDA
AVSEWQLFDLRGKRMWEDTVSVLPSAKRAIVSFKEDSTALLQAEELRREVHVISSEEQAKALDLNGAYIVLLDPPPSLDM
LARLLEGKAPERLYFIFLNQEDHFLSTFPARDHFKWYYAFLLKRGAFDVKKHGSELARHKGWSVDTINFMTKVFFDLGFV
KIENGVLSVVSGVKKRDLTDSQTYQAKQQLMELDQKLNYSSAEELKEWLNKLMKQDSEACESTRRT

Nucleotide


Download         Length: 2361 bp        

>NTDB_id=423580 G4P54_RS14110 WP_167872987.1 2638625..2640985(-) (recJ) [Bacillus tequilensis strain EA-CB0015]
ATGTTAGCGTCAAAAATGCGATGGGAAATCCAGCGACCAGATCAGGATAAGGTCAAATCACTCACAGAACAATTGCATAT
AACACCTCTTGTTGCGTCCCTGCTTGTAAAAAGAGGCTTTGATACGGCAGAAAGCGCGAAGCTGTTTTTGCATACAAAGG
ATGCCGATTTTTATGACCCTTTTGAAATGAAGGGCATGAGAGAAGCGGCAGAGCGAATAAAACAGGCGATTGCACAACAA
GAACAGATTATGATATATGGCGATTATGATGCCGATGGAGTTACCAGTACGTCAGTGATGCTGCACACGCTGCAAAAGCT
GTCGGCACAAGTTGATTTTTATATACCTGACCGCTTTAAGGAAGGATATGGCCCTAATGAACAGGCGTTTCGTTCGATAA
AAGAACGAGGCTTCTCTCTGATTATTACGGTTGATACAGGAATTGCCGCTGTGCATGAAGCAAAGGTGGCAAAGGAACTC
GGGCTGGATGTCATTATTACCGATCACCATGAGCCGGGGCCGGAGCTTCCGGATGTCCACGCAATCGTCCACCCGAAGCA
GCCGGGCTGCACCTACCCGTTTAAGGAGCTGGCCGGGGTCGGAGTGGCGTTTAAGCTTGCTCACGCTTTATTGGGCGAAC
TCCCGGATGAACTGCTTGACCTGGCGGCAATCGGCACGATTGCTGATCTTGTCCCGCTGCATGATGAAAACAGATTAATT
GCAACACTGGGACTTGAAAGGCTTCGGCGCACGAATCGGCTGGGCTTAAAAGAGCTGATGAAGCTGTCAGGCGGAGACAT
CGGAGAAGCGAACGAAGAAACAGTTGGGTTCCAGCTGGCACCAAGGCTGAATGCTGTCGGAAGAATCGAACAGGCAGATC
CCGCCGTTCATTTGCTCATGTCGGAGGATTCGTTTGAAGCGGAAGAGCTTGCCGCAGAAATTGACCGGCTGAACAAAGAG
CGCCAAAAGATGGTCAGCAAAATGACGGATGAAGCGATTGAAATGGTTGAACAGCAAGGTCTCGAGCAAACTGCAATCGT
CGTGGCCAAAGCCGGATGGAATCCGGGAGTCGTTGGAATTGTGGCTTCAAAGCTTGTCGACCGTTTCTACCGCCCGGCCA
TTGTGCTTGGCATTGACGAAGAAAGAGGAATTGCTAAAGGCTCGGCCAGAAGCATCAGGGGCTTTAATTTATTCGAGAGC
CTTTCTGAATGCAGAGATATTCTTCCTCATTTCGGCGGCCATCCAATGGCGGCAGGGATGACGCTGAATGCAGCAGATGT
GCCGGATTTGCGAAACAGGCTGAATGAAATAGCGGACAATACGCTTACGGAAGAGGATTTTATTCCTGTACAGGAAGTCG
ATCTCGTCTGCGGTGTCGAGGATATTACAGTTGAAAGCATCACAGAGATGAACATGCTGTCTCCATTCGGCATGCTGAAC
CCGAAACCGCACGTTCTCGTAGAAAATGCTGTGCTGGAAGATGTCCGCAAGATCGGCGCTAATAAAAATCATGTCAAAAT
GACGGTCAGAAATGAGTCGTCTCAGCTTGATTGCGTCGGTTTTAATAAAGGTGAGCTTGAAGAAGGCATCGTACCGGGCT
CTAGAATTTCCATAGTCGGTGAGATGTCAATCAACGAATGGAACAATCGAAAAAAGCCGCAGCTTATGATTAAGGATGCC
GCTGTTTCTGAATGGCAGCTGTTTGATTTAAGAGGAAAACGGATGTGGGAAGATACGGTTTCCGTCCTTCCATCAGCTAA
ACGGGCCATAGTCTCTTTCAAAGAAGACTCAACAGCACTTCTTCAGGCTGAAGAACTTCGCCGTGAAGTGCACGTCATCA
GCTCTGAAGAACAAGCGAAGGCGTTAGACCTTAATGGCGCCTATATTGTATTGCTGGATCCGCCGCCTTCGTTGGACATG
CTTGCACGTTTGCTGGAAGGAAAAGCGCCTGAGCGGTTATATTTCATTTTTCTCAATCAAGAGGACCACTTTTTATCAAC
ATTTCCCGCAAGAGACCACTTCAAATGGTATTATGCGTTCTTGCTGAAAAGAGGCGCTTTTGACGTAAAAAAACACGGTT
CAGAGCTCGCAAGACATAAAGGCTGGTCCGTTGACACAATCAATTTCATGACAAAGGTGTTTTTTGATCTAGGTTTTGTT
AAAATAGAGAATGGTGTGCTGTCTGTAGTTAGCGGAGTAAAGAAACGCGACTTAACAGACTCACAAACATATCAAGCGAA
ACAGCAGCTGATGGAACTGGATCAAAAGCTGAATTATTCTTCTGCTGAGGAGCTGAAGGAATGGCTGAATAAGCTGATGA
AACAAGATTCAGAGGCTTGTGAAAGTACGAGGAGGACATAA

Domains

Predicted by InterproScan.

RecJ OB domain (RecJ_OB)

(453-559)

DHH family (DHH)

(82-226)

DHHA1 domain (DHHA1)

(315-437)

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(566-769)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WMU2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

95.929

100

0.959