Detailed information NTG0423215

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: G4D59_RS12115
• Genome accession: NZ_CP048811
• Coordinates: 2358346..2360730 (-)
• Length: 794 a.a.
• NCBI ID: WP_017367701.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain SCU11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2353346..2365730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4D59_RS12080 (G4D59_12030)	-	2354250..2354978 (+)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-
G4D59_RS12085 (G4D59_12035)	-	2354993..2355802 (+)	810	WP_017367698.1	transporter substrate-binding domain-containing protein	-
G4D59_RS12090 (G4D59_12040)	-	2355887..2356540 (+)	654	WP_007501460.1	amino acid ABC transporter permease	-
G4D59_RS12095 (G4D59_12045)	-	2356556..2357206 (+)	651	WP_017367699.1	amino acid ABC transporter permease	-
G4D59_RS12100 (G4D59_12050)	-	2357245..2357376 (-)	132	WP_008342695.1	YrzQ family protein	-
G4D59_RS12105 (G4D59_12055)	-	2357397..2357588 (-)	192	WP_003216308.1	hypothetical protein	-
G4D59_RS12110 (G4D59_12060)	-	2357602..2358060 (-)	459	WP_017367700.1	PRC-barrel domain-containing protein	-
G4D59_RS12115 (G4D59_12065)	recD2	2358346..2360730 (-)	2385	WP_017367701.1	ATP-dependent RecD-like DNA helicase	Machinery gene
G4D59_RS12120 (G4D59_12070)	-	2360750..2361403 (-)	654	WP_017367702.1	tetratricopeptide repeat protein	-
G4D59_RS12125 (G4D59_12075)	mnmA	2361465..2362583 (-)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
G4D59_RS12130 (G4D59_12080)	-	2362678..2363820 (-)	1143	WP_017367703.1	cysteine desulfurase family protein	-
G4D59_RS12135 (G4D59_12085)	cymR	2363839..2364258 (-)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-
G4D59_RS12140 (G4D59_12090)	-	2364465..2365730 (+)	1266	WP_008342715.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88995.34 Da
• Isoelectric Point: 5.0157

>NTDB_id=423215 G4D59_RS12115 WP_017367701.1 2358346..2360730(-) (recD2) [Bacillus altitudinis strain SCU11]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFSALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIIETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=423215 G4D59_RS12115 WP_017367701.1 2358346..2360730(-) (recD2) [Bacillus altitudinis strain SCU11]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
CGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAAACAGCATCTGTCA
CAGGGTACTTCTCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGTGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAACAAGGCATTATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGGAAAAAGACGGCGGAAGAAATCGTCGGCAAGTTAGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTTTTGTATGACGTCCCGCGCCTGTCAAAAAAGAAGGCAGATAAGCTGGCTGCCGCACTTCAGGAGCATCAGGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAACCCTTATCAGCTCGTCAAAGACGTAGAGGGGATTGGATTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAAGACGGTCATACGTACATACAAACGAAAGATCTGATCATTGAAACCCGTAAATTGCTGAATCAAACAGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATCATTGAAGATG
ATCGCTGTTATCATCCTTCGCTCTTTTATGCGGAACAAAGTGTTGCAAAACGCATTCAAAAAATTGTCTCTCAAACAGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTTCTCGCACTTGGTGAATTGGAGGAGCGGCTGGGTGTCCAGTATGCACC
GACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCCCCGATGCTGCTCTTAACAGGCGGGCCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTACAGCGATCTTCACGGCGTATCTCTTGATCCGAGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTACTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCGACTGGACTCCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGACCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACACTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCACATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGGTATTCAGCAAAGGACATTCAAGTACTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTTCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCTTTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGCGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACAGAAAAAGAAGATATGGCGGTCATCTCCTTTGATGGAAATGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGCGAGGAATCAGCATTAGAGTGGGGCGTGAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACCATGCGTCTTACTGAAACGGAAGAAATCATGGACGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.252	100	0.804