Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   G3T48_RS06775 Genome accession   NZ_CP048760
Coordinates   1297292..1297807 (-) Length   171 a.a.
NCBI ID   WP_167840722.1    Uniprot ID   -
Organism   Campylobacter jejuni strain ZS005     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1292292..1302807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T48_RS06760 (G3T48_06760) - 1292404..1294221 (-) 1818 WP_167840719.1 motility associated factor glycosyltransferase family protein -
  G3T48_RS06765 (G3T48_06765) - 1294218..1296041 (-) 1824 WP_167840720.1 motility associated factor glycosyltransferase family protein -
  G3T48_RS06770 (G3T48_06770) - 1296051..1297292 (-) 1242 WP_167840721.1 DUF2920 family protein -
  G3T48_RS06775 (G3T48_06775) ctsG 1297292..1297807 (-) 516 WP_167840722.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  G3T48_RS06780 (G3T48_06780) tsaD 1297808..1298815 (-) 1008 WP_087695691.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  G3T48_RS06785 (G3T48_06785) - 1298812..1300206 (-) 1395 WP_167840723.1 M99 family carboxypeptidase catalytic domain-containing protein -
  G3T48_RS06790 (G3T48_06790) dxr 1300208..1301278 (-) 1071 WP_052805826.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  G3T48_RS06795 (G3T48_06795) cdsA 1301275..1302000 (-) 726 WP_167840724.1 phosphatidate cytidylyltransferase -
  G3T48_RS06800 (G3T48_06800) - 1302009..1302347 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18648.58 Da        Isoelectric Point: 7.8505

>NTDB_id=422678 G3T48_RS06775 WP_167840722.1 1297292..1297807(-) (ctsG) [Campylobacter jejuni strain ZS005]
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKKCLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFISSSSSKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=422678 G3T48_RS06775 WP_167840722.1 1297292..1297807(-) (ctsG) [Campylobacter jejuni strain ZS005]
ATGAGAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGTACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAAAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTATAAGCTCTTCTAGTAGCAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment