Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GXM18_RS26755 Genome accession   NZ_CP048626
Coordinates   5745781..5747625 (+) Length   614 a.a.
NCBI ID   WP_018598360.1    Uniprot ID   -
Organism   Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5740781..5752625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GXM18_RS26740 (GXM18_26785) - 5741532..5742920 (+) 1389 WP_018598363.1 MATE family efflux transporter -
  GXM18_RS26745 (GXM18_26790) - 5743170..5743604 (+) 435 WP_018598362.1 MarR family winged helix-turn-helix transcriptional regulator -
  GXM18_RS26750 (GXM18_26795) - 5743623..5745788 (+) 2166 WP_018598361.1 ABC transporter ATP-binding protein -
  GXM18_RS26755 (GXM18_26800) rcrQ 5745781..5747625 (+) 1845 WP_018598360.1 ABC transporter ATP-binding protein Regulator
  GXM18_RS26760 (GXM18_26805) aroF 5748163..5749173 (+) 1011 WP_018598358.1 3-deoxy-7-phosphoheptulonate synthase -
  GXM18_RS26765 (GXM18_26810) - 5749178..5751385 (+) 2208 WP_018598357.1 DNA topoisomerase III -
  GXM18_RS26770 (GXM18_26815) - 5751456..5751809 (-) 354 WP_018598356.1 metalloregulator ArsR/SmtB family transcription factor -

Sequence

Protein


Download         Length: 614 a.a.        Molecular weight: 68601.48 Da        Isoelectric Point: 7.0121

>NTDB_id=421940 GXM18_RS26755 WP_018598360.1 5745781..5747625(+) (rcrQ) [Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471]
MSDTARRPRGPMGGHGKGMPGEKAKDFKGAMMRLVKYMERYKFRLILMVLFAVGGTVFNIVGPKILGKATTELFNGLVSK
INGGSGINFDKIVQILLACLCLYLVSALLSFIQGFIMTGISNDVTYSLRKDISQKINRIPMKYFESRTHGEILSRITNDV
DTLQMGINQSVTQLITSCTTLIGVLVMMLSINVWMTLAALLILPISMAIISKVMKHSQKYFQAQQKYLGEVNGQVEEIYS
GHNVVKAFNKEESVISEFEKTNEKLYSSAWRSQFFSGMMMPIMQFVGNLGYVMVALLGGFMVIKSKIEVGDVQAFFQYIR
NFTQPIQQIAQVTNMLQSSAAASERVFEFLDVEEEEQTVENPADVSHVDGNVEIRHTSFGYDPNKIIIHDFSADIKAGQK
VAIVGPTGAGKTTMIKLLMRFYDVNSGEILIDGHNIKDFNRSELRELFGMVLQDTWLFHGTIMENIRYGRLDATDEEVIA
AAKAAHAHHFIMSQPGGYQMVLNEETNNISQGQKQLLTIARAILADNRLLILDEATSSVDTRTEERIQKAMDNLMKGRTS
FVIAHRLSTIRDADLILVMKDGDIIEQGTHKALLEAGGFYANLYNSQFEKAEAM

Nucleotide


Download         Length: 1845 bp        

>NTDB_id=421940 GXM18_RS26755 WP_018598360.1 5745781..5747625(+) (rcrQ) [Blautia producta ATCC 27340 = DSM 2950 strain JCM 1471]
ATGAGTGATACAGCGAGAAGACCGAGAGGGCCGATGGGTGGTCACGGAAAAGGAATGCCGGGCGAGAAGGCAAAAGATTT
TAAGGGTGCCATGATGCGTCTGGTGAAATATATGGAGCGGTATAAGTTCAGGCTGATACTGATGGTCCTGTTTGCCGTAG
GCGGTACGGTATTTAATATTGTGGGGCCTAAGATTTTAGGTAAGGCTACCACTGAACTGTTTAACGGACTGGTATCCAAG
ATAAACGGCGGCAGCGGAATCAATTTTGACAAGATTGTTCAGATCCTTTTGGCATGTCTCTGTCTGTACCTGGTCAGCGC
CCTGCTGTCCTTTATCCAGGGATTTATTATGACAGGGATATCAAATGATGTCACATACAGCCTGAGAAAAGACATCTCCC
AGAAGATCAACAGAATTCCCATGAAATATTTTGAGAGCAGGACCCACGGTGAGATTCTCTCAAGGATCACCAATGATGTG
GATACCCTGCAGATGGGTATCAACCAGAGTGTAACCCAGCTCATCACGTCCTGCACCACGCTCATAGGCGTGCTTGTGAT
GATGCTGAGTATCAATGTATGGATGACACTGGCGGCACTGCTGATCCTTCCTATCTCAATGGCGATCATCAGCAAGGTCA
TGAAGCATTCACAAAAATATTTCCAGGCACAGCAGAAGTATCTGGGTGAAGTAAACGGACAGGTGGAGGAGATTTATAGC
GGACATAATGTTGTAAAGGCATTTAACAAGGAAGAGTCCGTGATCAGCGAATTTGAGAAGACCAATGAAAAGCTGTACAG
CTCTGCATGGCGCTCTCAGTTTTTCTCCGGTATGATGATGCCTATCATGCAGTTTGTGGGTAACCTGGGATATGTGATGG
TTGCTCTGTTGGGCGGATTCATGGTGATCAAGAGCAAGATCGAAGTAGGTGATGTGCAGGCGTTTTTCCAGTATATCAGA
AACTTCACACAGCCTATCCAACAGATCGCCCAGGTGACAAATATGCTGCAGTCCTCGGCAGCGGCATCTGAGAGAGTGTT
TGAATTCCTGGATGTTGAGGAGGAAGAGCAGACAGTGGAAAACCCGGCAGATGTCAGCCATGTTGACGGCAATGTAGAAA
TCCGCCACACATCATTTGGATATGACCCCAATAAGATCATTATCCATGACTTCTCCGCAGATATAAAAGCAGGGCAGAAG
GTGGCTATTGTGGGTCCCACAGGTGCCGGCAAGACAACCATGATCAAACTGCTGATGCGGTTCTATGATGTCAATTCCGG
AGAGATCCTGATCGATGGTCATAACATCAAGGACTTTAACAGAAGTGAGCTGCGTGAGCTGTTTGGTATGGTCTTGCAGG
ATACCTGGCTGTTCCACGGAACAATTATGGAAAATATCCGCTATGGCCGTCTGGATGCCACAGATGAAGAGGTCATTGCA
GCGGCAAAGGCAGCACATGCCCATCACTTTATCATGTCACAGCCCGGTGGTTATCAGATGGTGCTGAACGAAGAGACAAA
CAATATCTCCCAGGGACAGAAACAGCTTCTGACCATTGCCAGAGCAATTCTGGCGGATAACAGGCTGCTGATCCTGGATG
AAGCTACTTCCTCTGTGGATACAAGAACAGAAGAGCGTATCCAAAAGGCCATGGATAATCTGATGAAGGGTAGAACCAGT
TTTGTGATCGCCCACAGGCTGTCCACTATCCGGGATGCGGATCTGATCCTTGTTATGAAAGACGGAGATATTATTGAACA
GGGAACTCATAAAGCCTTGCTGGAAGCCGGCGGATTTTATGCAAACCTGTATAACAGCCAGTTTGAGAAGGCAGAGGCCA
TGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(389-537)

ABC transporter transmembrane region (ABC_membrane)

(45-325)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.195

95.44

0.489

Multiple sequence alignment