Detailed information NTG0420475

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: IB936_RS08360
• Genome accession: NZ_CP061133
• Coordinates: 1677130..1678398 (+)
• Length: 422 a.a.
• NCBI ID: WP_187830517.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1672130..1683398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IB936_RS08345 (IB936_08345)	-	1672583..1674556 (+)	1974	WP_011529042.1	amidase family protein	-
IB936_RS08350 (IB936_08350)	pabB	1674741..1676498 (+)	1758	WP_021299283.1	aminodeoxychorismate synthase component I	-
IB936_RS08355 (IB936_08355)	-	1676531..1677097 (+)	567	WP_011529044.1	aminodeoxychorismate/anthranilate synthase component II	-
IB936_RS08360 (IB936_08360)	rarA	1677130..1678398 (+)	1269	WP_187830517.1	replication-associated recombination protein A	Machinery gene
IB936_RS08375 (IB936_08375)	-	1678897..1679337 (+)	441	WP_042769804.1	GNAT family N-acetyltransferase	-
IB936_RS08380 (IB936_08380)	-	1679392..1679898 (+)	507	WP_011529046.1	DNA topology modulation protein	-
IB936_RS08385 (IB936_08385)	smeZ	1680147..1680848 (+)	702	WP_011529047.1	streptococcal mitogenic exotoxin SmeZ	-
IB936_RS08390 (IB936_08390)	-	1681175..1681399 (-)	225	WP_011529048.1	hypothetical protein	-
IB936_RS08395 (IB936_08395)	-	1681576..1683204 (+)	1629	WP_021299280.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46662.14 Da
• Isoelectric Point: 6.2940

>NTDB_id=420475 IB936_RS08360 WP_187830517.1 1677130..1678398(+) (rarA) [Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGQYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLLD

Nucleotide

• Length: 1269 bp

>NTDB_id=420475 IB936_RS08360 WP_187830517.1 1677130..1678398(+) (rarA) [Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCCTTACTTGAGAACGGCACCATTATCATGATTGGCGCAACCACTGAGAATCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCTCCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCAATACGCTGGCAGCAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTTAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.33	99.052	0.588