Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GWK37_RS14845 Genome accession   NZ_CP048002
Coordinates   2982824..2983015 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain CACC 316     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2977824..2988015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWK37_RS14815 (GWK37_14825) argF 2978676..2979647 (+) 972 WP_038457606.1 ornithine carbamoyltransferase -
  GWK37_RS14820 (GWK37_14830) - 2979723..2979902 (+) 180 WP_003155070.1 YjzC family protein -
  GWK37_RS14825 (GWK37_14835) - 2979938..2980123 (-) 186 WP_007409129.1 YjzD family protein -
  GWK37_RS14830 (GWK37_14840) - 2980384..2981118 (+) 735 WP_115940909.1 hypothetical protein -
  GWK37_RS14835 (GWK37_14845) - 2981201..2981767 (+) 567 WP_115940908.1 hypothetical protein -
  GWK37_RS14840 (GWK37_14850) med 2981858..2982811 (+) 954 WP_115940907.1 BMP family ABC transporter substrate-binding protein Regulator
  GWK37_RS14845 (GWK37_14855) comZ 2982824..2983015 (+) 192 WP_003155061.1 ComZ family protein Regulator
  GWK37_RS14850 (GWK37_14860) - 2983044..2983262 (-) 219 WP_007610579.1 hypothetical protein -
  GWK37_RS14855 (GWK37_14865) - 2983430..2984368 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  GWK37_RS14860 (GWK37_14870) fabF 2984391..2985629 (+) 1239 WP_021494977.1 beta-ketoacyl-ACP synthase II -
  GWK37_RS14865 (GWK37_14875) - 2985713..2986498 (+) 786 WP_115940906.1 DUF2268 domain-containing protein -
  GWK37_RS14870 (GWK37_14880) - 2986672..2987658 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=419255 GWK37_RS14845 WP_003155061.1 2982824..2983015(+) (comZ) [Bacillus velezensis strain CACC 316]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=419255 GWK37_RS14845 WP_003155061.1 2982824..2983015(+) (comZ) [Bacillus velezensis strain CACC 316]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment