Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E3S87_RS02420 | Genome accession | NZ_CP047793 |
| Coordinates | 456008..456307 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain UP_764 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 451008..461307
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S87_RS02380 (E3S87_02380) | - | 451069..451272 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S87_RS02385 (E3S87_02385) | - | 451269..452255 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3S87_RS02390 (E3S87_02390) | - | 452255..452584 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S87_RS02395 (E3S87_02395) | - | 452581..453204 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3S87_RS02400 (E3S87_02400) | comGA | 453256..454230 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S87_RS02405 (E3S87_02405) | comGB | 454202..455272 (+) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S87_RS02410 (E3S87_02410) | comGC | 455286..455597 (+) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S87_RS02415 (E3S87_02415) | comGD | 455575..456021 (+) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S87_RS02420 (E3S87_02420) | comGE | 456008..456307 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3S87_RS02425 (E3S87_02425) | comGF | 456225..456722 (+) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S87_RS02430 (E3S87_02430) | - | 456819..456965 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S87_RS02435 (E3S87_02435) | - | 456955..457479 (+) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3S87_RS02440 (E3S87_02440) | gcvT | 457638..458729 (+) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S87_RS02445 (E3S87_02445) | gcvPA | 458749..460095 (+) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=416420 E3S87_RS02420 WP_000844413.1 456008..456307(+) (comGE) [Staphylococcus aureus strain UP_764]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=416420 E3S87_RS02420 WP_000844413.1 456008..456307(+) (comGE) [Staphylococcus aureus strain UP_764]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |