Detailed information NTG0416412

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: E3S87_RS02035
• Genome accession: NZ_CP047793
• Coordinates: 382758..385235 (+)
• Length: 825 a.a.
• NCBI ID: WP_160175412.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain UP_764
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 377758..390235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3S87_RS02015 (E3S87_02015)	-	377936..378949 (-)	1014	WP_000985898.1	LLM class flavin-dependent oxidoreductase	-
E3S87_RS02020 (E3S87_02020)	-	379259..380401 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
E3S87_RS02025 (E3S87_02025)	mnmA	380402..381520 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
E3S87_RS02030 (E3S87_02030)	-	382088..382756 (+)	669	WP_000567025.1	tetratricopeptide repeat protein	-
E3S87_RS02035 (E3S87_02035)	recD2	382758..385235 (+)	2478	WP_160175412.1	ATP-dependent RecD-like DNA helicase	Machinery gene
E3S87_RS02040 (E3S87_02040)	alaS	385578..388208 (+)	2631	WP_160175413.1	alanine--tRNA ligase	-
E3S87_RS02045 (E3S87_02045)	-	388271..388531 (+)	261	WP_000426912.1	IreB family regulatory phosphoprotein	-
E3S87_RS02050 (E3S87_02050)	ruvX	388535..388963 (+)	429	WP_000939059.1	Holliday junction resolvase RuvX	-
E3S87_RS02055 (E3S87_02055)	-	388978..389286 (+)	309	WP_000134779.1	DUF1292 domain-containing protein	-
E3S87_RS02060 (E3S87_02060)	-	389571..390209 (+)	639	WP_000342267.1	O-methyltransferase	-

Sequence

Protein

• Length: 825 a.a.
• Molecular weight: 92949.69 Da
• Isoelectric Point: 4.5100

>NTDB_id=416412 E3S87_RS02035 WP_160175412.1 382758..385235(+) (recD2) [Staphylococcus aureus strain UP_764]
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVGFLPNIVEGDVYTFKGQVVDHPRYGKQLKAE
TFEKEMPQTKEAIISYLSSDLFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIKGIGFNKANQLARNIGIAYNDNERLKAALLYTLEEECIKQG
HTYLPINVVIDLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEIKSVQNLFRIKTHTNKLTEIE
QSDLQMHIGEIEDANQVNYAASQKEALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLA
APTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDEMSMVDTWLFHQFLSAVPLDAQLIFVGDEDQ
LPSVGPGQVFKDLIESKAIPRVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPTVVEKVVTSAV
NKGYTMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDTREIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
AKENALNKDVLVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKTSLVLL
GDSEAFDIGLKTNGQARLTQLCTLLKNYFNSEDEDMLENTATNDTGASQTTIDDQVEAPMSSNASEEVTSDSTKTDTNVL
TEATMFKIDPMINMGEITPYDFIER

Nucleotide

• Length: 2478 bp

>NTDB_id=416412 E3S87_RS02035 WP_160175412.1 382758..385235(+) (recD2) [Staphylococcus aureus strain UP_764]
ATGTCAGACCCTACACTATTTGATTATTCAATGATCAAAGGTACTGTTGAAGCGATATTGTTTCAAAACAGTGATAATTT
TTATACAGTGCTTAAAGTAGATACTATTGAAACAAATGAAGACTTTGATACAATGCCAACTGTTGTAGGGTTTCTTCCGA
ATATTGTTGAAGGCGATGTCTACACATTTAAAGGGCAAGTTGTTGATCATCCACGTTATGGTAAACAATTAAAAGCAGAG
ACTTTTGAAAAAGAAATGCCACAAACGAAAGAAGCAATTATAAGTTATTTATCAAGTGATTTGTTTAAAGGTGTAGGTAA
AAAGACAGCTCAAAATATTGTTAATACATTAGGTGACAATGCGATAAACGATATATTAGATGACCATTCAGTTCTAGAAA
AAGTTTCGGGATTATCTAAAAAGAAACAGAAACAAATTGCAGAACAAATTTCAGCAAATCAAGAATCTGAAAAAATAATG
ATTCGTTTACATGATTTAGGGTTTGGTCCTAAACTTTCAATGGCAATTTATCAGTTTTATCTCGGTGATACACTGACTAT
TTTAGATCGAAATCCATATCAATTGATTTATGATATTAAAGGTATTGGTTTTAATAAAGCAAATCAACTTGCTAGAAATA
TTGGTATCGCTTATAACGATAATGAACGATTAAAAGCTGCGTTGCTCTATACGTTAGAAGAAGAATGTATTAAACAGGGA
CATACATATTTGCCTATCAATGTTGTTATAGATTTAACGGTTGATGTCTTAAATTATCAAGATGAAGAGGTCATCGAACC
TGAAAAATTAGACGAAATGTTGCAATACTTAAATGAGGAAAAACGACTAATTATTGACAATGAACAAGTTGCAATTCCAA
GTTTGTATTATTCTGAAATCAAAAGTGTTCAAAACTTATTCAGAATAAAGACGCATACAAATAAACTTACGGAAATTGAA
CAGTCAGATTTACAAATGCATATTGGCGAAATAGAGGATGCGAATCAAGTGAACTATGCAGCTTCACAAAAAGAAGCTTT
GCAAACGGCTATCAATTCTAAGGTGATGCTATTAACCGGTGGACCGGGAACAGGAAAGACGACAGTAATTAAAGGCATTG
TAGAATTATATGCTGAGATTCATGGCTTATCATTAGATTATGATGATTATGTCAATGATGATTATCCAGTTGTATTAGCA
GCGCCAACAGGAAGAGCGTCCAAGAGACTACAAGAGTCAACTGGATTAGAAGCTATGACGATTCATCGTTTAATAGGTTG
GAATCAAGACACAAAGCCAGAGGATATATTAGAAAATGAAATTAACGCACGACTCATAATCATTGATGAGATGTCTATGG
TAGATACTTGGTTGTTCCACCAATTTTTAAGTGCAGTTCCTTTAGATGCACAATTGATATTTGTAGGTGATGAGGACCAA
TTGCCTTCTGTAGGTCCTGGTCAAGTATTTAAAGATTTAATTGAATCGAAAGCTATACCACGAGTTAATCTGACTGAAGT
ATATCGTCAACAAGATGGTTCAAGCATTATAGAATTAGCACATCGAATGAAGTTGGGTCAGAAAATTGATATTACACAGC
GTTTTCATGATAGAAGTTTTATTAACTGTCAGGCAAACCAAATACCAACAGTTGTTGAGAAGGTAGTTACTAGTGCTGTT
AATAAAGGGTATACTATGGCTGATATTCAAGTGCTTGCACCAATGTATAAAGGAAATGCCGGTATTAAACGTTTAAATCA
AGTTTTACAAGATATTTTAAACCCTAAAAAGAAAGACACACGAGAAATTGAGTTTGGTGATGTAGTCTTTAGAAAAGGTG
ACAAAGTATTACAACTTGTTAATAGGCCAAATGATAACATATTCAATGGTGACATAGGAGTTATTGTTGGTATTTTTTGG
GCGAAAGAAAATGCCCTTAATAAAGATGTGCTTGTTGTGGATTTTGAAGGTAATGAAATTACATTTACGAAACAAGATAT
GATGGAATTAACACATGCATATTGTACATCAATCCATAAATCACAAGGTTCAGAATTTCCTATTGTTATCATGCCTATTG
TTAAACAGTATTTTAGAATGTTACAAAGACCGATATTATATACTGGTTTAACTAGAGCGAAAACCAGTTTAGTTTTACTT
GGTGATTCAGAAGCATTTGATATTGGATTGAAAACAAATGGTCAAGCGCGTTTAACACAATTATGTACATTGTTGAAAAA
TTATTTTAATTCAGAAGATGAAGACATGCTGGAAAATACAGCAACTAATGATACAGGAGCTTCGCAAACGACAATAGATG
ATCAAGTAGAAGCGCCAATGTCATCGAATGCTAGTGAAGAAGTTACGTCTGATTCAACAAAAACAGATACAAATGTATTA
ACGGAAGCTACAATGTTTAAAATTGACCCAATGATTAATATGGGAGAAATCACGCCGTATGACTTTATAGAACGTTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-720)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	52.722	91.273	0.481