Detailed information NTG0415920

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: H7793_RS08285
• Genome accession: NZ_CP060642
• Coordinates: 1664827..1666095 (+)
• Length: 422 a.a.
• NCBI ID: WP_002982538.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY1312
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1659827..1671095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7793_RS08270 (H7793_08280)	-	1660280..1662253 (+)	1974	WP_136021536.1	amidase family protein	-
H7793_RS08275 (H7793_08285)	pabB	1662438..1664195 (+)	1758	WP_136021535.1	aminodeoxychorismate synthase component I	-
H7793_RS08280 (H7793_08290)	-	1664228..1664794 (+)	567	WP_011285207.1	aminodeoxychorismate/anthranilate synthase component II	-
H7793_RS08285 (H7793_08295)	rarA	1664827..1666095 (+)	1269	WP_002982538.1	replication-associated recombination protein A	Machinery gene
H7793_RS08300 (H7793_08310)	-	1666594..1667034 (+)	441	WP_011018265.1	GNAT family N-acetyltransferase	-
H7793_RS08305 (H7793_08315)	-	1667089..1667595 (+)	507	WP_011285208.1	DNA topology modulation protein	-
H7793_RS08310 (H7793_08320)	-	1667844..1668545 (+)	702	WP_011285209.1	exotoxin beta-grasp domain-containing protein	-
H7793_RS08315 (H7793_08325)	-	1669275..1670903 (+)	1629	WP_021775366.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46645.07 Da
• Isoelectric Point: 6.3774

>NTDB_id=415920 H7793_RS08285 WP_002982538.1 1664827..1666095(+) (rarA) [Streptococcus pyogenes strain TSPY1312]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=415920 H7793_RS08285 WP_002982538.1 1664827..1666095(+) (rarA) [Streptococcus pyogenes strain TSPY1312]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGCGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAGACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGTCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTTTTATCTGCCTTACAAAAATCCATTAGAGGTTCTGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCCAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCATTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.712	98.815	0.59