Detailed information NTG0415826

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: H7795_RS08180
• Genome accession: NZ_CP060641
• Coordinates: 1647496..1648764 (+)
• Length: 422 a.a.
• NCBI ID: WP_023612685.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain TSPY210
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1642496..1653764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7795_RS08155 (H7795_08135)	-	1642620..1643090 (-)	471	WP_023612684.1	DUF3013 family protein	-
H7795_RS08160 (H7795_08140)	rhuM	1643155..1643376 (-)	222	WP_175393065.1	RhuM family protein	-
H7795_RS09310	-	1643533..1643649 (+)	117	Protein_1556	IS3 family transposase	-
H7795_RS08165 (H7795_08145)	-	1643790..1644110 (-)	321	WP_023612681.1	hypothetical protein	-
H7795_RS08170 (H7795_08150)	pabB	1645108..1646865 (+)	1758	WP_023612688.1	aminodeoxychorismate synthase component I	-
H7795_RS08175 (H7795_08155)	-	1646898..1647464 (+)	567	WP_228615123.1	aminodeoxychorismate/anthranilate synthase component II	-
H7795_RS08180 (H7795_08160)	rarA	1647496..1648764 (+)	1269	WP_023612685.1	replication-associated recombination protein A	Machinery gene
H7795_RS08195 (H7795_08175)	-	1649261..1649701 (+)	441	WP_021775367.1	GNAT family N-acetyltransferase	-
H7795_RS08200 (H7795_08180)	-	1649756..1650262 (+)	507	WP_023612678.1	DNA topology modulation protein	-
H7795_RS08205 (H7795_08185)	-	1650683..1651327 (-)	645	WP_020905526.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46620.06 Da
• Isoelectric Point: 6.2940

>NTDB_id=415826 H7795_RS08180 WP_023612685.1 1647496..1648764(+) (rarA) [Streptococcus pyogenes strain TSPY210]
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTRYAFRTFNATIDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKTAIQ
LAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLDLAVMSTSPNEDSSRHISLETMENSLQRSYITMDKNGDGHY
DVLSALQKAIRGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRTSGNLPIPRHLRDGQYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD

Nucleotide

• Length: 1269 bp

>NTDB_id=415826 H7795_RS08180 WP_023612685.1 1647496..1648764(+) (rarA) [Streptococcus pyogenes strain TSPY210]
ATGCCTGATCATTTAGCGCTCAGAATGCGCCCCAAAACCATTTCAGAGGTCATCGGACAAAAACACCTTGTTGGTGAAGG
CAAAATCATCCGTCGCATGGTGGAAGCAAATAGACTATCGTCCATGATCCTCTATGGCCCTCCAGGAATCGGTAAAACTT
CCATTGCTTCTGCTATTGCTGGTACTACTAGATATGCCTTTCGGACCTTTAATGCCACCATTGACAGCAAAAAACGTCTC
CAAGAAATTGCGGAAGAAGCTAAATTTTCTGGTGGCTTGGTATTATTACTAGACGAGATTCATCGCCTTGACAAAACAAA
ACAAGATTTTCTTTTACCTTTACTTGAGAATGGCACCATTATCATGATTGGCGCAACCACTGAGAACCCCTTCTTTTCAG
TGACACCCGCTATCAGAAGCAGGGTCCAGATTTTTGAATTGGAACCACTTTCTAACGAGGATATTAAAACAGCCATTCAG
CTAGCAATTTCCGACAAAGAACGGGGATTTCCTTTTTTAGTGACAATTGATGATGAGGCGCTAGATTTCATTGTTACCGC
CACAAATGGAGACCTACGATCTGCTTATAATTCCTTGGATCTAGCAGTCATGTCTACTTCTCCTAATGAAGATAGTAGCC
GTCATATTAGTCTAGAGACAATGGAAAATAGCCTGCAGCGTAGTTATATTACCATGGATAAAAACGGGGACGGGCATTAT
GATGTGCTATCAGCCCTCCAAAAAGCTATTCGCGGCTCCGATGTCAATGCTAGCCTGCACTACGCCGCTCGTTTAGTAGA
AGCTGGAGACTTGCCTAGTTTAGCAAGACGATTGACCATTATTGCTTACGAAGATATTGGCTTAGCCAACCCTGACGCCC
AAGTTCATACCGTCACCGCACTAGATGCCGCTCAACGCATTGGTTTTCCAGAAGCTCGTATTCTTATCGCTAACGTGGTC
ATTGATTTGGCTCTATCACCTAAATCAAATTCAGCTTATTTAGCTATGGATGCAGCTTTAGCTGATTTGAGAACATCAGG
TAACCTCCCCATTCCAAGGCATCTTAGAGACGGGCAGTATGCTGGCAGTAAGGACCTAGGCAATGCCAAAGATTACCTCT
ACCCACACGCCTACCCTGAAAAATGGGTCAAACAACAATACCTACCAGATAAATTAGTAGGACATCATTATTTTGAAGCC
AATGAAACCGGTAAATACGAACGCGCACTTGGTTCAAATAAAGAGCGTATTGATAAGCTCTCAGACTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• AAA C-terminal domain (AAA_assoc_2) (174-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.233	98.815	0.585