Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   H7798_RS08510 Genome accession   NZ_CP060638
Coordinates   1728584..1729258 (-) Length   224 a.a.
NCBI ID   WP_002982458.1    Uniprot ID   A0ABU0A9I5
Organism   Streptococcus pyogenes strain TSPY141     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1723584..1734258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7798_RS08495 (H7798_08535) - 1725222..1726610 (-) 1389 WP_111718012.1 sensor histidine kinase -
  H7798_RS08500 (H7798_08540) - 1726607..1727260 (-) 654 WP_002991237.1 response regulator transcription factor -
  H7798_RS08505 (H7798_08545) - 1727354..1728571 (-) 1218 WP_111718013.1 ABC transporter permease -
  H7798_RS08510 (H7798_08550) amiE 1728584..1729258 (-) 675 WP_002982458.1 ABC transporter ATP-binding protein Regulator
  H7798_RS08515 (H7798_08555) - 1729245..1730513 (-) 1269 WP_023610761.1 efflux RND transporter periplasmic adaptor subunit -
  H7798_RS08520 (H7798_08560) - 1730937..1731221 (-) 285 WP_002982442.1 hypothetical protein -
  H7798_RS08525 (H7798_08565) - 1731368..1731664 (-) 297 WP_032459955.1 DUF4298 domain-containing protein -
  H7798_RS08530 (H7798_08570) - 1731806..1733605 (-) 1800 WP_111718014.1 LPXTG cell wall anchor domain-containing protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 24826.67 Da        Isoelectric Point: 5.7977

>NTDB_id=415543 H7798_RS08510 WP_002982458.1 1728584..1729258(-) (amiE) [Streptococcus pyogenes strain TSPY141]
MLNLKDIRKSYHLGTEEFAILKGIDLEVNEGDFLAIMGPSGSGKSTLMNIIGCLDKPGSGSYAIEGRDVSSLSDNELADL
RNQKIGFVFQNFNLMPKLTACQNVELPLTYMNVPKKERRKRALEMLKLVGLEERSEFKPMELSGGQKQRVAIARALVTNP
SFILGDEPTGALDTKTSVQIMDLFKQFNDNGKTIIIITHEPEVAALCKKTVILRDGNIEHSDIE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=415543 H7798_RS08510 WP_002982458.1 1728584..1729258(-) (amiE) [Streptococcus pyogenes strain TSPY141]
TTGTTAAACCTTAAAGATATTCGAAAAAGCTATCATCTTGGAACTGAAGAATTTGCGATTTTAAAAGGAATCGATTTAGA
AGTTAACGAGGGTGACTTTTTAGCCATCATGGGACCATCAGGTTCGGGAAAGTCAACATTGATGAATATCATTGGGTGTT
TAGATAAACCTGGCTCTGGCTCATATGCCATTGAAGGCAGAGACGTGTCATCCTTATCTGATAATGAACTTGCTGATTTG
CGCAATCAAAAAATCGGCTTTGTTTTTCAAAACTTTAACCTGATGCCCAAGCTAACAGCTTGTCAAAATGTCGAATTGCC
CTTGACTTATATGAATGTTCCTAAAAAAGAGCGTCGCAAACGAGCCCTAGAGATGTTAAAGCTAGTAGGACTAGAAGAAC
GTAGTGAATTTAAACCGATGGAGCTATCTGGTGGGCAAAAACAGCGTGTAGCGATTGCAAGAGCTTTAGTCACTAACCCG
AGTTTTATCCTTGGTGATGAGCCAACAGGTGCACTAGACACAAAAACCAGCGTCCAAATCATGGACCTATTTAAACAATT
CAATGATAACGGCAAAACGATTATTATCATCACACACGAGCCTGAAGTAGCTGCCCTATGCAAAAAGACAGTGATCCTAA
GAGATGGTAATATAGAACATTCCGATATAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.454

100

0.366