Detailed information NTG0415079

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: H8S71_RS13300
• Genome accession: NZ_CP060417
• Coordinates: 2590445..2591710 (+)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ONU 559
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2585445..2596710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8S71_RS13280 (H8S71_13275)	yrrB	2586816..2587436 (-)	621	WP_235701204.1	tetratricopeptide repeat protein	-
H8S71_RS13285 (H8S71_13280)	mnmA	2587522..2588637 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
H8S71_RS13290 (H8S71_13285)	iscSA	2588668..2589807 (-)	1140	WP_161621708.1	cysteine desulfurase family protein	-
H8S71_RS13295 (H8S71_13290)	cymR	2589826..2590242 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
H8S71_RS13300 (H8S71_13295)	rarA	2590445..2591710 (+)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
H8S71_RS13305 (H8S71_13300)	tcdA	2591750..2592514 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
H8S71_RS13315 (H8S71_13310)	aspS	2592849..2594627 (-)	1779	WP_015384241.1	aspartate--tRNA ligase	-
H8S71_RS13320 (H8S71_13315)	hisS	2594641..2595915 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
H8S71_RS13325 (H8S71_13320)	yrzK	2596297..2596467 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=415079 H8S71_RS13300 WP_019712521.1 2590445..2591710(+) (rarA) [Bacillus subtilis subsp. subtilis strain ONU 559]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=415079 H8S71_RS13300 WP_019712521.1 2590445..2591710(+) (rarA) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCTAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAATGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCAAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993