Detailed information NTG0041060

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SGPB_RS01610
• Genome accession: NC_015600
• Coordinates: 297388..298317 (+)
• Length: 309 a.a.
• NCBI ID: WP_013851464.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus ATCC 43144
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 292388..303317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGPB_RS01590 (SGPB_0276)	-	292609..294264 (+)	1656	WP_013851462.1	peptide ABC transporter substrate-binding protein	-
SGPB_RS01595 (SGPB_0277)	-	294374..295288 (+)	915	WP_003063307.1	ABC transporter permease	-
SGPB_RS01600 (SGPB_0278)	-	295299..296330 (+)	1032	WP_013851463.1	ABC transporter permease	-
SGPB_RS01605 (SGPB_0279)	oppD	296342..297388 (+)	1047	WP_003063311.1	ABC transporter ATP-binding protein	Regulator
SGPB_RS01610 (SGPB_0280)	amiF	297388..298317 (+)	930	WP_013851464.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35038.82 Da
• Isoelectric Point: 5.6193

>NTDB_id=41060 SGPB_RS01610 WP_013851464.1 297388..298317(+) (amiF) [Streptococcus pasteurianus ATCC 43144]
MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINKGEIDFDGETISHL
KGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVSSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSVELDGQPREMREITPGHFVLCTEAEAEAYRKEL

Nucleotide

• Length: 930 bp

>NTDB_id=41060 SGPB_RS01610 WP_013851464.1 297388..298317(+) (amiF) [Streptococcus pasteurianus ATCC 43144]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCATTGACTTTTAACGAAGGTAAAAAGAACGAAGTAAA
AGCTATTGATAATATCAGTTTTGATATTTACGAAGGTGAAGTTTTCGGTCTTGTTGGAGAATCAGGTTCTGGTAAGACAA
CCGTTGGTCGTGCTATTTTGAAATTGTACGATATTAATAAAGGTGAAATTGATTTTGATGGTGAAACCATCTCTCACCTT
AAAGGGAAAGAATTGCACGAATTCCGTAAAAATGCTCAAATGATTTTCCAAGACCCACAAGCTAGTCTTAATGGTCGTAT
GAAAATTCGTGACATTGTTGCGGAAGGACTTGACATCCATAAATTAGTTAGCAGTAAAGAAGAGCGTGACCAAAAAGTTC
AAGATTTACTTGCTTTAGTTGGACTTAACAAAGACCATTCAACACGCTATCCACATGAATTTTCAGGTGGACAACGTCAA
CGTATTGGTATCGCTCGTGCTCTTGCCGTTGAACCAAAGTTCATCATTGCCGATGAACCAATTTCAGCCCTTGACGTGTC
AATCCAAGCTCAAGTTGTTAACCTTATGCAAAAACTTCAAAGAGAACAGGGTTTAACATATCTCTTTATCGCTCACGATT
TGTCAATGGTTAAATACATCTCAGATCGTATTGGGGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGATGAT
GTTTATAATCATCCAATTCACCCATATACTAAGAGCTTGTTGACTGCAATTCCAGAACCAGACCCAGAGTCTGAAAGAAA
TCGTATCCATGAAGAGTATGATCCAAGTGTAGAACTAGATGGCCAACCACGTGAAATGCGTGAAATTACACCTGGACACT
TTGTTCTTTGTACAGAAGCAGAAGCAGAAGCTTATAGAAAAGAATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-272)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	55.082	98.706	0.544
amiF	Streptococcus salivarius strain HSISS4	55.082	98.706	0.544
amiF	Streptococcus thermophilus LMG 18311	54.754	98.706	0.54