Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   H1R75_RS04965 Genome accession   NZ_CP059471
Coordinates   943530..945266 (+) Length   578 a.a.
NCBI ID   WP_182001802.1    Uniprot ID   -
Organism   Streptococcus equinus strain MDC1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 938530..950266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1R75_RS04945 (H1R75_04945) glyA 938911..940161 (+) 1251 WP_182001799.1 serine hydroxymethyltransferase -
  H1R75_RS04950 (H1R75_04950) - 940204..941181 (+) 978 WP_182001801.1 nucleoid-associated protein -
  H1R75_RS04955 (H1R75_04955) - 941181..941783 (+) 603 WP_021142234.1 lysozyme family protein -
  H1R75_RS04960 (H1R75_04960) - 941806..943526 (+) 1721 Protein_911 ABC transporter ATP-binding protein -
  H1R75_RS04965 (H1R75_04965) rcrQ 943530..945266 (+) 1737 WP_182001802.1 ABC transporter ATP-binding protein Regulator
  H1R75_RS04970 (H1R75_04970) - 945337..946794 (-) 1458 WP_182001803.1 alpha-amylase -
  H1R75_RS04975 (H1R75_04975) - 946907..947377 (-) 471 WP_232516856.1 TVP38/TMEM64 family protein -
  H1R75_RS04980 (H1R75_04980) guaA 947809..949371 (+) 1563 WP_024344141.1 glutamine-hydrolyzing GMP synthase -
  H1R75_RS04985 (H1R75_04985) - 949792..950253 (+) 462 WP_182001805.1 LytTR family DNA-binding domain-containing protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64007.10 Da        Isoelectric Point: 5.7160

>NTDB_id=410469 H1R75_RS04965 WP_182001802.1 943530..945266(+) (rcrQ) [Streptococcus equinus strain MDC1]
MKARNQSTTTRRLFKDLFSQKGLVIGATLGTIAQVALTVYLPVLIGNAVDVVLSPKSLTLILPIILKMVIVVALNTLIQW
LNPLIYNCLTFGYIYDLRQRVMEKLNQMPIAYLDKKSSGDLVSRVTTDAEQLSNGLLMVFNQFFIGVLTIIITIVTMADI
DLLMLGLVLVLTPLSLFLARFIANKSYHLYQKQTKSRGRQTQYIEEMIRQESLLHVFNAQDAAIDTFTEINDTYADYSQG
AIFYSSTVNPSTRFINSLIYALLAGVGALRIMSGAFTVGQLTTFLNYVNQYTKPFNDISSVLSELQGAIACADRLYAILD
EENEPLSVTAQLDEDKIQGQIEFKDVSFGYTPQKTLINHLSLSIPAASKVAIVGPTGAGKSTLINLLMRFYEVNSGAIYL
DGVSMSDYSVEELRKQIGMVLQETWLKVGTIHDNIAYGNPQATREEVIQAAKAANADFFIRQLPNGYDTYLADAGASLSQ
GQRQLLTIARIFVKLPKILILDEATSSIDTRTEVLVQEAFEKLMQGRTSFIIAHRLSTIQSADCILVMVDGDIVEHGTHA
ELMAKQGVYYQMQTAQAG

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=410469 H1R75_RS04965 WP_182001802.1 943530..945266(+) (rcrQ) [Streptococcus equinus strain MDC1]
ATGAAAGCAAGAAATCAATCAACTACAACTCGTCGCTTGTTTAAAGACCTCTTTTCTCAAAAAGGACTTGTTATTGGAGC
AACGCTTGGTACGATTGCCCAAGTCGCATTGACTGTTTACCTTCCTGTTTTGATTGGTAATGCAGTCGATGTCGTTCTTT
CTCCAAAATCATTGACTTTGATTTTGCCAATCATCTTGAAAATGGTTATCGTTGTCGCGCTTAATACTTTAATCCAATGG
CTTAATCCATTGATTTATAATTGTTTAACCTTTGGTTACATTTACGATTTGCGTCAAAGGGTAATGGAAAAATTAAATCA
AATGCCGATTGCTTATCTTGATAAGAAAAGTTCTGGAGATTTGGTTAGTCGTGTAACGACTGATGCAGAGCAATTAAGTA
ATGGTCTTTTGATGGTCTTTAATCAGTTTTTCATTGGTGTTTTGACCATTATCATTACCATTGTTACGATGGCTGATATT
GATCTTCTGATGCTTGGTTTGGTATTGGTTTTAACACCACTTTCTCTTTTCTTGGCACGATTTATTGCTAATAAGAGTTA
TCACCTTTACCAAAAGCAAACCAAATCTCGCGGTCGTCAGACACAATATATCGAAGAGATGATTCGTCAAGAAAGTTTGC
TACATGTTTTTAACGCACAAGATGCTGCCATTGATACCTTTACTGAAATCAATGATACCTACGCAGATTATTCACAAGGT
GCAATTTTCTACTCATCAACTGTCAACCCTTCAACGCGTTTTATCAATAGTTTGATTTATGCGTTGCTTGCAGGAGTGGG
AGCGTTGCGCATCATGTCAGGTGCCTTTACAGTTGGTCAGTTAACAACGTTTTTGAATTATGTTAACCAATATACTAAAC
CTTTCAATGATATTTCATCAGTCTTGTCAGAATTGCAAGGAGCTATCGCTTGTGCGGATCGCCTGTATGCTATCTTGGAT
GAAGAAAACGAGCCACTTTCAGTGACTGCACAACTTGATGAGGACAAGATTCAAGGACAAATTGAATTTAAAGACGTGTC
ATTTGGTTACACTCCTCAGAAAACATTGATTAATCACTTGAGTTTGTCTATTCCAGCAGCTTCAAAAGTGGCTATTGTAG
GTCCGACAGGAGCAGGAAAATCAACATTGATTAATCTCTTGATGCGTTTTTATGAAGTAAATAGTGGAGCCATTTATTTG
GATGGTGTATCGATGTCTGATTATTCTGTTGAGGAACTTCGCAAGCAAATTGGTATGGTTCTGCAAGAGACTTGGCTAAA
AGTTGGAACAATCCATGATAATATTGCTTATGGTAATCCTCAAGCAACACGAGAAGAAGTTATCCAAGCAGCAAAAGCAG
CTAATGCAGATTTCTTCATCCGTCAATTACCAAATGGTTATGACACATATTTGGCTGATGCTGGAGCTTCACTGTCTCAA
GGACAACGTCAGCTTTTGACGATTGCACGTATTTTTGTGAAATTACCAAAAATCTTGATACTTGATGAAGCAACGTCATC
TATTGATACGCGTACAGAAGTGCTAGTTCAAGAAGCCTTCGAAAAATTGATGCAGGGTCGTACTAGTTTTATCATTGCCC
ACCGTTTATCAACTATCCAATCAGCTGACTGTATTTTAGTCATGGTTGATGGAGATATTGTTGAACATGGCACACACGCA
GAATTAATGGCAAAACAAGGTGTTTACTATCAAATGCAAACAGCACAAGCTGGGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(25-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.571

96.886

0.374