Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GQO96_RS01585 | Genome accession | NZ_CP046898 |
| Coordinates | 341915..342340 (+) | Length | 141 a.a. |
| NCBI ID | WP_032030057.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain A1429 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 336915..347340
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQO96_RS01575 (GQO96_01575) | pilY1 | 337569..341423 (+) | 3855 | WP_032030056.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| GQO96_RS01580 (GQO96_01580) | pilY2 | 341436..341918 (+) | 483 | WP_001046418.1 | type IV pilin protein | Machinery gene |
| GQO96_RS01585 (GQO96_01585) | pilE | 341915..342340 (+) | 426 | WP_032030057.1 | type IV pilin protein | Machinery gene |
| GQO96_RS01590 (GQO96_01590) | rpsP | 342487..342738 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| GQO96_RS01595 (GQO96_01595) | rimM | 342758..343306 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| GQO96_RS01600 (GQO96_01600) | trmD | 343352..344092 (+) | 741 | WP_032030058.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| GQO96_RS01605 (GQO96_01605) | rplS | 344300..344668 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| GQO96_RS01610 (GQO96_01610) | - | 344721..345662 (-) | 942 | WP_104131029.1 | lipase family alpha/beta hydrolase | - |
| GQO96_RS01615 (GQO96_01615) | - | 345777..346808 (-) | 1032 | WP_032030060.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15196.36 Da Isoelectric Point: 7.8144
>NTDB_id=409176 GQO96_RS01585 WP_032030057.1 341915..342340(+) (pilE) [Acinetobacter baumannii strain A1429]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSDMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSDMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=409176 GQO96_RS01585 WP_032030057.1 341915..342340(+) (pilE) [Acinetobacter baumannii strain A1429]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGACATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGACATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.163 |
100 |
0.972 |
| comF | Acinetobacter baylyi ADP1 |
50.714 |
99.291 |
0.504 |