Detailed information NTG0040818

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SSUD9_RS10215
• Genome accession: NC_017620
• Coordinates: 2096615..2097901 (+)
• Length: 428 a.a.
• NCBI ID: WP_002939120.1
• Uniprot ID: -
• Organism: Streptococcus suis D9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2091615..2102901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD9_RS10190 (SSUD9_2112)	-	2092143..2093405 (-)	1263	WP_002939093.1	hypothetical protein	-
SSUD9_RS10195 (SSUD9_2113)	-	2093419..2094165 (-)	747	WP_002939095.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	-
SSUD9_RS10200 (SSUD9_2114)	prmA	2094167..2095120 (-)	954	WP_002939103.1	50S ribosomal protein L11 methyltransferase	-
SSUD9_RS10205 (SSUD9_2116)	-	2095716..2096069 (-)	354	WP_009910982.1	ASCH domain-containing protein	-
SSUD9_RS10210 (SSUD9_2117)	-	2096071..2096541 (-)	471	WP_002939116.1	DUF3013 family protein	-
SSUD9_RS10215 (SSUD9_2118)	rarA	2096615..2097901 (+)	1287	WP_002939120.1	replication-associated recombination protein A	Machinery gene
SSUD9_RS10225 (SSUD9_2119)	nrdG	2098382..2098939 (-)	558	WP_002939123.1	anaerobic ribonucleoside-triphosphate reductase activating protein	-
SSUD9_RS10235 (SSUD9_2120)	-	2099126..2099620 (-)	495	WP_002939125.1	GNAT family N-acetyltransferase	-
SSUD9_RS10240 (SSUD9_2121)	-	2099622..2100968 (-)	1347	WP_009910991.1	bifunctional metallophosphatase/5'-nucleotidase	-
SSUD9_RS11710 (SSUD9_2122)	-	2100970..2101104 (-)	135	WP_002939130.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 47301.95 Da
• Isoelectric Point: 6.4389

>NTDB_id=40818 SSUD9_RS10215 WP_002939120.1 2096615..2097901(+) (rarA) [Streptococcus suis D9]
MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLAADYFTA
NDTGKYERALGMTQEKIKNLKKNRRQNP

Nucleotide

• Length: 1287 bp

>NTDB_id=40818 SSUD9_RS10215 WP_002939120.1 2096615..2097901(+) (rarA) [Streptococcus suis D9]
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGAAGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAGATTATCCGTCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCAGGGATTGGTAAGACCT
CGATTGCGTCCGCCATTGCTGGTACGACCAAGTATGCCTTTCGAACCTTTAATGCCACGACAGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGCCTGGTCCTCATGCTCGATGAAATCCACCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTACAACCTTTGAAAACCAGTCACATCCGACAGGCCTTGGAA
CTGGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCCGTCACCATTGAACCTGAGGCCCTGGATTTTCTGGCAAATGC
GACAAACGGTGACCTTCGTGCCGCTTACAATTCTCTAGAACTGGCTGTGCTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTGGAAAATAGCCTGCAAAAGTCCTACATCAGCATGGACAAGAACGGCGATGCCCACTAC
GATATCCTCTCCGCCCTACAAAAATCCATTCGAGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGATCTGCCTAGTCTGGCCCGTCGCTTGACGGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACGGTGACGGCCCTTGAAGCCGCCCAGAAAATTGGCTTTCCAGAGGCACGCATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATGCAGCTCTGGCTGATTTGCGGAAAAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGATGGCCACTATGCTGGCAGCAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCGCATGCCTATCCTGAAAAATGGGTGGACCAGCAATACCTGCCCGATAAGTTACTAGCTGCGGACTACTTCACCGCC
AACGACACTGGAAAATACGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAATAGACGCCAAAA
TCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.809	97.664	0.584