Detailed information NTG0406566

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: HYQ63_RS35100
• Genome accession: NZ_CP058693
• Coordinates: 8140212..8141579 (+)
• Length: 455 a.a.
• NCBI ID: WP_179937768.1
• Uniprot ID: -
• Organism: Streptomyces sp. Rer75
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 8135212..8146579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HYQ63_RS35080 (HYQ63_35080)	-	8136182..8137045 (-)	864	WP_179937764.1	peptidylprolyl isomerase	-
HYQ63_RS35085 (HYQ63_35085)	-	8137203..8137922 (+)	720	WP_179937765.1	MBL fold metallo-hydrolase	-
HYQ63_RS35090 (HYQ63_35090)	hisS	8137937..8139199 (+)	1263	WP_179937766.1	histidine--tRNA ligase	-
HYQ63_RS35095 (HYQ63_35095)	-	8139471..8140127 (+)	657	WP_179937767.1	vitamin K epoxide reductase family protein	-
HYQ63_RS35100 (HYQ63_35100)	rarA	8140212..8141579 (+)	1368	WP_179937768.1	replication-associated recombination protein A	Machinery gene
HYQ63_RS35105 (HYQ63_35105)	-	8141675..8142420 (-)	746	Protein_6990	DUF2470 domain-containing protein	-
HYQ63_RS35110 (HYQ63_35110)	rpsD	8142614..8143225 (+)	612	WP_009713641.1	30S ribosomal protein S4	-
HYQ63_RS35115 (HYQ63_35115)	-	8143524..8143964 (+)	441	WP_179937769.1	DUF948 domain-containing protein	-
HYQ63_RS35120 (HYQ63_35120)	-	8143973..8144305 (+)	333	WP_179937770.1	DUF6167 family protein	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 48274.72 Da
• Isoelectric Point: 6.2966

>NTDB_id=406566 HYQ63_RS35100 WP_179937768.1 8140212..8141579(+) (rarA) [Streptomyces sp. Rer75]
MEPDLFTAAAEDRQEKDPSSSPLAVRMRPRTLDEVVGQQHLLRPGSPLRRLVGEGSGGPAGPSSVLLWGPPGIGKTTLAY
VVSQATQKRFVELSAITAGVKEVRAVIDGARRSSGAYGRETVLFLDEIHRFSKAQQDLLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLESLTDDDLRGLLRRALADERGLGGAVTLPDEAEAHLLRIAGGDARRALTALEAGAGSAIAKGEAE
ITLTTLEEAVDRAAVTYDRAGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVALIGFPEAALTLSHATIALALAPKSNAATTAIGAALADVRAGLAGPVPPHLRDGHYKGAEKLGHAQGYLY
PHDLPGGIAAQQYAPDKIHGKRYYEPTRYGAEARYADVVERVRARLRGDPPPESS

Nucleotide

• Length: 1368 bp

>NTDB_id=406566 HYQ63_RS35100 WP_179937768.1 8140212..8141579(+) (rarA) [Streptomyces sp. Rer75]
GTGGAGCCAGATCTGTTCACCGCCGCCGCCGAGGACCGCCAGGAGAAGGACCCGTCCAGCAGTCCGCTGGCCGTGCGCAT
GCGCCCGCGCACGCTGGACGAGGTCGTGGGCCAGCAGCATCTGCTGCGCCCCGGATCGCCGTTGCGGAGACTGGTCGGCG
AGGGCAGCGGAGGACCGGCAGGGCCGTCCTCGGTGCTGCTGTGGGGCCCGCCCGGCATCGGGAAGACCACGCTCGCGTAC
GTGGTCAGCCAGGCCACCCAGAAGCGGTTCGTGGAGCTGTCGGCGATCACCGCGGGGGTGAAGGAGGTGCGGGCCGTCAT
CGACGGGGCGCGCCGCTCCTCGGGGGCGTACGGCCGGGAGACCGTGCTCTTCCTGGACGAGATCCACCGCTTCAGCAAGG
CGCAGCAGGATTTGCTGCTGCCCGCCGTGGAGAACCGCTGGGTCACCCTGATCGCGGCCACCACCGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTGTCCCGCTCGCTGCTGCTCACCCTGGAGTCGCTCACCGACGACGATCTGCGCGGGCTGCT
GCGCCGAGCGCTGGCCGACGAGCGGGGGCTCGGCGGCGCGGTCACCCTCCCCGACGAGGCCGAGGCGCATCTGCTGCGGA
TCGCGGGCGGCGACGCCCGGCGGGCGCTCACCGCCCTGGAGGCGGGTGCCGGGTCGGCGATCGCCAAGGGCGAGGCGGAG
ATCACGCTGACCACGCTGGAGGAGGCGGTCGACCGGGCCGCGGTCACCTACGACCGCGCCGGTGATCAGCACTATGACGT
GGCGAGCGCGCTCATCAAGTCGATCCGCGGCTCGGACGTGGACGCCGCGCTGCACTATCTGGCGCGGATGATCGAGGCGG
GGGAGGACCCGCGGTTCATCGCGCGCCGGCTGATGATCTCGGCGAGTGAGGACATCGGGCTGGCCGATCCGACCGCCCTG
CCCACCGCCGTGGCGGCGGCGCAGGCGGTCGCGCTGATCGGTTTCCCCGAGGCCGCCCTGACGCTGAGCCACGCCACGAT
CGCGCTGGCGCTCGCGCCCAAGTCCAATGCGGCCACGACGGCGATAGGGGCGGCGCTGGCGGATGTCCGGGCGGGGCTCG
CGGGCCCGGTGCCGCCGCATCTGCGGGACGGGCACTACAAGGGCGCCGAAAAGCTCGGCCATGCCCAGGGCTATCTGTAT
CCGCACGATCTGCCGGGCGGCATCGCGGCACAGCAGTACGCGCCGGACAAGATCCACGGAAAGCGCTACTACGAGCCGAC
GCGGTACGGGGCGGAGGCCCGCTACGCCGATGTGGTCGAGCGGGTCCGGGCGCGGCTGCGCGGTGACCCGCCGCCGGAGT
CCTCGTAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.581	94.505	0.431