Detailed information NTG0406423

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: GPA07_RS07580
• Genome accession: NZ_CP046653
• Coordinates: 1461756..1464140 (+)
• Length: 794 a.a.
• NCBI ID: WP_008360847.1
• Uniprot ID: -
• Organism: Bacillus sp. ms-22
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1456756..1469140

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPA07_RS07560 (GPA07_07560)	-	1458227..1458646 (+)	420	WP_008360856.1	Rrf2 family transcriptional regulator	-
GPA07_RS07565 (GPA07_07565)	-	1458665..1459807 (+)	1143	WP_008360854.1	cysteine desulfurase family protein	-
GPA07_RS07570 (GPA07_07570)	mnmA	1459903..1461021 (+)	1119	WP_008360852.1	tRNA 2-thiouridine(34) synthase MnmA	-
GPA07_RS07575 (GPA07_07575)	-	1461083..1461736 (+)	654	WP_008360849.1	tetratricopeptide repeat protein	-
GPA07_RS07580 (GPA07_07580)	recD2	1461756..1464140 (+)	2385	WP_008360847.1	ATP-dependent RecD-like DNA helicase	Machinery gene
GPA07_RS07585 (GPA07_07585)	-	1464431..1464889 (+)	459	WP_071169241.1	PRC-barrel domain-containing protein	-
GPA07_RS07590 (GPA07_07590)	-	1464903..1465094 (+)	192	WP_003216308.1	hypothetical protein	-
GPA07_RS07595 (GPA07_07595)	-	1465115..1465246 (+)	132	WP_008362324.1	YrzQ family protein	-
GPA07_RS07600 (GPA07_07600)	-	1465488..1466138 (-)	651	WP_008358536.1	amino acid ABC transporter permease	-
GPA07_RS07605 (GPA07_07605)	-	1466154..1466807 (-)	654	WP_008358534.1	amino acid ABC transporter permease	-
GPA07_RS07610 (GPA07_07610)	-	1466888..1467697 (-)	810	WP_008358532.1	transporter substrate-binding domain-containing protein	-
GPA07_RS07615 (GPA07_07615)	-	1467712..1468440 (-)	729	WP_157292292.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89006.43 Da
• Isoelectric Point: 5.1558

>NTDB_id=406423 GPA07_RS07580 WP_008360847.1 1461756..1464140(+) (recD2) [Bacillus sp. ms-22]
MQEHPDQIKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMINLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVNEMDVANQIIALGEAKEMIIEDERCYHPSLFYAEQSVAKRIRKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPNDIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIQCSADQIKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENHIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLAKTEEIMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=406423 GPA07_RS07580 WP_008360847.1 1461756..1464140(+) (recD2) [Bacillus sp. ms-22]
GTGCAGGAACATCCAGATCAAATAAAGCTTGAAGACGAACCATTTTTAAAAGGGACGGTTCAAGCGGTTATTTTCCATAA
CGAAAGTAATTTATATTCGGTGTTAAAAGTCAAAGTCATTGAAACATCAGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCGGCACTTCATGAGGAGGAAACCTACACCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAG
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCTACAACAAAACAAGGGATTATTCATTATCTCTCAAGTGACTTATT
CGAAGGAATAGGGAAGAAGACGGCGGAAGAAATCGTCGGGAAACTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGACGTTCCGCGCCTGTCAAAAAAGAAGGCAGACAAGCTGGCTGCCGCACTTCAGGAGCATCAAGGA
CTGGAGCAAATCATGATCAACCTGAATCAATATGGCTTTGGTCCGCAGCTCAGTATGAAAATTTACCAAGTGTACGAGAG
TGAAACCTTGCAGAAGATTGAGGAAAATCCTTATCAGCTTGTCAAAGACGTAGAAGGGATTGGGTTTATTAAAGCAGATG
AGCTCGGCGCTAGAACAGGGATATCTGGAAATGACCCAGACCGCATTCGTGCAGCTCTGCTTTATACTGTCGAGACAGCA
AGCCTTCAGGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAGCTGCTCAATCAAACAGGTAA
TGACTACAAAGTGAATGAAATGGACGTTGCCAATCAGATCATTGCACTTGGAGAAGCGAAAGAGATGATCATAGAAGATG
AGCGGTGCTATCATCCGTCGCTTTTTTATGCGGAGCAAAGTGTGGCGAAACGCATTCGGAAAATCGTCTCTCAAACAGAA
TATGCTGATCAATTTCCTGAATCAGAATTCCTTCTAGCACTCGGTGAGCTGGAGGAACGGCTGGGCGTCCAGTATGCGCC
GACACAAAAGGAAGCCATTCAAAAGGCGCTCATGTCCCCAATGCTGCTCTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGGATTGTCGAGCTTTATAGCGATCTTCATGGCGTTTCTCTTGACCCTAGTGATTATAAAAAAGATGAG
TCTTTTCCGTTTGTGCTTGCTGCACCAACTGGACGCGCGGCGAAACGAATGACTGAATCTACAGGGCTTCCAGCTGTGAC
CATTCACCGGCTATTAGGCTGGAATGGGTCAGAAGGCTTCTCACATGATGAAGATCAGCCGATTGAAGGAAAACTCGTGA
TTATTGATGAATCGAGTATGCTAGATATTTGGCTGGCTAATCATTTGTTTAAGGCGATTCCAAATGACATTCAAGTCATT
ATGGTTGGAGACGAACATCAGCTTCCATCTGTCGGACCCGGTCAGGTGTTAAGAGACCTGCTTGCATCACAAGCCGTACC
AGCTGTAACGTTAACTGATATTTACCGTCAGGCAGACGGTTCATCCATTGTTGAGCTTGCCCATGATATGAAAAATGGTG
TTTTACCAAAAGATATTACCGCACGCTCGAAGGATCGATCCTTCATTCAATGTTCAGCTGATCAAATAAAAGAAGTCATC
GAAAAAGTTGTCAGCAACGCTGCTCAAAAGGGCTATTCAGCAAAGGACATTCAGGTGCTGGCACCGATGTATAAAGGGAA
AGCTGGTATCAACGAGCTGAATAAAATGCTTCAGCAAATTTTGAACCCTAAAAAGCCAAAAGGAAGAGAAATTCCCTTTG
GTGACGTCGTCTACCGGACAGGTGATAAGGTGCTTCAACTTGTCAATCAGCCGGAGAATCATATCTTTAATGGGGATATT
GGTGAAATCGTATCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCGGTGATTTCTTTTGATGGAAACGA
AATCACGTTTACAAAAAAAGATTTTCATCAATTTACCCATGCTTATTGCTGCTCTATTCACAAATCTCAGGGCAGTGAAT
TCCCCATTGTTGTGCTGCCAGTCGTCAGAAGCTATTATCGAATGCTTCGGCGAAATCTACTGTACACAGCCATTACACGC
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCCTTGGAGTGGGGCGTGAAAAATAATGAGGATTCCCTTAGACA
AACGTCCTTAACAATGCGTCTTGCTAAGACCGAAGAAATCATGGATGCTGAGCTTGCAGCGCTTCAAAAAGAGCTGCCTT
TCAGCGTACACGATGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCAAGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.497	100	0.796