Detailed information
Bioinformatically predicted
Overview
| Name | recU | Type | Machinery gene |
| Locus tag | S9968_RS01555 | Genome accession | NZ_CP058666 |
| Coordinates | 274404..275003 (+) | Length | 199 a.a. |
| NCBI ID | WP_000248792.1 | Uniprot ID | Q3K380 |
| Organism | Streptococcus agalactiae strain S9968 | ||
| Function | plasmid transformation; homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 269404..280003
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S9968_RS01525 (S9968_100308) | - | 269551..270033 (+) | 483 | WP_000159885.1 | S-ribosylhomocysteine lyase | - |
| S9968_RS01530 (S9968_100309) | - | 270258..271721 (-) | 1464 | WP_001287870.1 | cell division site-positioning protein MapZ family protein | - |
| S9968_RS01535 (S9968_100310) | - | 271734..272888 (-) | 1155 | WP_000664849.1 | class I SAM-dependent RNA methyltransferase | - |
| S9968_RS01545 (S9968_100311) | gpsB | 273358..273690 (-) | 333 | WP_000146544.1 | cell division regulator GpsB | - |
| S9968_RS01550 (S9968_100312) | - | 273811..274329 (-) | 519 | WP_000843096.1 | DUF1273 domain-containing protein | - |
| S9968_RS01555 (S9968_100313) | recU | 274404..275003 (+) | 600 | WP_000248792.1 | Holliday junction resolvase RecU | Machinery gene |
| S9968_RS01560 (S9968_100314) | pbp1a | 274990..277236 (+) | 2247 | WP_000628369.1 | penicillin-binding protein PBP1A | - |
| S9968_RS01565 (S9968_100315) | pepC | 277282..278616 (-) | 1335 | WP_000041114.1 | aminopeptidase C | - |
| S9968_RS01570 (S9968_100316) | nadE | 278729..279550 (-) | 822 | WP_000174854.1 | ammonia-dependent NAD(+) synthetase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 23101.69 Da Isoelectric Point: 9.8314
>NTDB_id=406317 S9968_RS01555 WP_000248792.1 274404..275003(+) (recU) [Streptococcus agalactiae strain S9968]
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGN
KSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQA
STTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGN
KSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
Nucleotide
Download Length: 600 bp
>NTDB_id=406317 S9968_RS01555 WP_000248792.1 274404..275003(+) (recU) [Streptococcus agalactiae strain S9968]
ATGGTTAACTATCCACATCAGCTTATTCGGAAAACAACAGTTACAAAATCAAAGAAAAAGAAAATCGATTTTGCCAACCG
TGGTATGTCATTTGAAGCTGCTATCAATGCAACCAATGACTACTATTTGTCTCACGAATTAGCTGTCATTCATAAGAAAC
CAACGCCAGTACAAATCGTCAAGGTAGATTATCCTAAACGTAGTCGTGCTAAGATTGTAGAAGCTTATTTTAGACAAGCT
TCTACTACTGATTATTCTGGTGTTTACAAAGGTTACTATATTGACTTTGAAGCCAAAGAAACCCGGCAGAAAACTGCTAT
GCCTATGAAAAATTTTCATGCTCACCAAATAGAGCACATGGCAAATGTATTACAGCAAAAAGGGATTTGCTTTGTCTTGC
TTCATTTTTCCACACTTAAGGAAACCTATCTACTCCCTGCTAATGAGTTAATTTCATTTTATCAGATTGATAAAGGCAAT
AAATCAATGCCTATTGATTATATCAGAAAAAATGGATTTTTCGTAAAGGAGAGTGCCTTTCCTCAAGTCCCTTACTTAGA
TATTATTGAAGAAAAATTATTAGGCGGTGATTACAATTAA
ATGGTTAACTATCCACATCAGCTTATTCGGAAAACAACAGTTACAAAATCAAAGAAAAAGAAAATCGATTTTGCCAACCG
TGGTATGTCATTTGAAGCTGCTATCAATGCAACCAATGACTACTATTTGTCTCACGAATTAGCTGTCATTCATAAGAAAC
CAACGCCAGTACAAATCGTCAAGGTAGATTATCCTAAACGTAGTCGTGCTAAGATTGTAGAAGCTTATTTTAGACAAGCT
TCTACTACTGATTATTCTGGTGTTTACAAAGGTTACTATATTGACTTTGAAGCCAAAGAAACCCGGCAGAAAACTGCTAT
GCCTATGAAAAATTTTCATGCTCACCAAATAGAGCACATGGCAAATGTATTACAGCAAAAAGGGATTTGCTTTGTCTTGC
TTCATTTTTCCACACTTAAGGAAACCTATCTACTCCCTGCTAATGAGTTAATTTCATTTTATCAGATTGATAAAGGCAAT
AAATCAATGCCTATTGATTATATCAGAAAAAATGGATTTTTCGTAAAGGAGAGTGCCTTTCCTCAAGTCCCTTACTTAGA
TATTATTGAAGAAAAATTATTAGGCGGTGATTACAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recU | Bacillus subtilis subsp. subtilis str. 168 |
48.223 |
98.995 |
0.477 |