Detailed information NTG0406152

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: GO995_RS01985
• Genome accession: NZ_CP046624
• Coordinates: 361990..362922 (+)
• Length: 310 a.a.
• NCBI ID: WP_074565179.1
• Uniprot ID: A0AAE8HM92
• Organism: Streptococcus ruminicola strain CNU_G3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 356990..367922

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO995_RS01965 (GO995_01965)	-	357208..358863 (+)	1656	WP_157628730.1	peptide ABC transporter substrate-binding protein	-
GO995_RS01970 (GO995_01970)	-	358975..359889 (+)	915	WP_006530948.1	ABC transporter permease	-
GO995_RS01975 (GO995_01975)	-	359901..360932 (+)	1032	WP_074565183.1	ABC transporter permease	-
GO995_RS01980 (GO995_01980)	oppD	360944..361990 (+)	1047	WP_074565181.1	ABC transporter ATP-binding protein	Regulator
GO995_RS01985 (GO995_01985)	amiF	361990..362922 (+)	933	WP_074565179.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35068.84 Da
• Isoelectric Point: 5.4755

>NTDB_id=406152 GO995_RS01985 WP_074565179.1 361990..362922(+) (amiF) [Streptococcus ruminicola strain CNU_G3]
MTENRKKLVELKNVSLTFNEGKKNEVKAINNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDISDGEIDFNGETVSNL
KGKELHEFRKNVQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVNSKEERDEKVQELLSLVGLNKDHMTRYPHEFSGGQRQ
RIGIARALAVQPKFIIADEPISALDVSIQAQVVNLMQKLQREKGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSED
VYNNPIHPYTKSLLSAIPEPDPESERERVHQVYDPSAELDGQEREMREITPGHFVLSTEAEAEEYKKALS

Nucleotide

• Length: 933 bp

>NTDB_id=406152 GO995_RS01985 WP_074565179.1 361990..362922(+) (amiF) [Streptococcus ruminicola strain CNU_G3]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTCTCTTTGACTTTCAACGAAGGCAAAAAGAATGAAGTAAA
AGCCATCAACAACGTCAGCTTCGATATCTATGAAGGTGAAGTCTTTGGTTTAGTTGGTGAATCAGGTTCTGGTAAAACAA
CTGTTGGACGTGCTATCTTAAAACTTTACGATATTAGTGATGGTGAAATCGACTTTAATGGAGAAACAGTTTCTAACCTT
AAAGGTAAAGAATTGCATGAATTCCGTAAAAATGTGCAAATGATTTTCCAAGACCCACAAGCAAGTCTTAATGGACGTAT
GAAAATCCGTGACATCGTTGCCGAAGGTCTTGATATTCACAAACTTGTTAATAGTAAAGAAGAGCGTGATGAAAAAGTTC
AAGAATTACTTTCTTTAGTAGGTTTGAACAAAGATCACATGACTCGTTACCCACACGAATTCTCTGGTGGTCAACGTCAA
CGTATTGGTATTGCACGTGCTCTTGCTGTACAACCAAAATTCATTATTGCTGATGAACCAATTTCTGCGCTTGACGTGTC
TATTCAAGCTCAAGTTGTTAACTTGATGCAAAAACTTCAACGCGAAAAAGGCTTAACTTATCTCTTCATCGCTCACGATT
TGTCAATGGTCAAATACATTTCAGATCGTATTGGTGTAATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGAAGAT
GTTTACAATAACCCAATTCACCCATACACTAAGAGTTTATTGTCTGCAATTCCAGAACCAGATCCAGAATCTGAACGTGA
ACGCGTGCATCAAGTTTATGATCCAAGTGCAGAACTTGATGGTCAAGAACGCGAAATGCGTGAAATTACACCAGGTCACT
TTGTACTTTCTACTGAAGCTGAAGCTGAAGAATATAAAAAAGCATTATCATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	56.536	98.71	0.558
amiF	Streptococcus thermophilus LMG 18311	56.209	98.71	0.555
amiF	Streptococcus salivarius strain HSISS4	55.7	99.032	0.552