Detailed information NTG0405755

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: GOY09_RS10750
• Genome accession: NZ_CP046590
• Coordinates: 2079691..2082084 (+)
• Length: 797 a.a.
• NCBI ID: WP_211552922.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain LI021
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2074691..2087084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOY09_RS10730 (GOY09_10700)	-	2075507..2076502 (-)	996	WP_164942353.1	LLM class flavin-dependent oxidoreductase	-
GOY09_RS10735 (GOY09_10705)	-	2076675..2077802 (+)	1128	WP_211552919.1	cysteine desulfurase family protein	-
GOY09_RS10740 (GOY09_10710)	mnmA	2077814..2078929 (+)	1116	WP_211552920.1	tRNA 2-thiouridine(34) synthase MnmA	-
GOY09_RS10745 (GOY09_10715)	-	2079029..2079688 (+)	660	WP_211552921.1	tetratricopeptide repeat protein	-
GOY09_RS10750 (GOY09_10720)	recD2	2079691..2082084 (+)	2394	WP_211552922.1	ATP-dependent RecD-like DNA helicase	Machinery gene
GOY09_RS10755 (GOY09_10725)	alaS	2082335..2084959 (+)	2625	WP_211552923.1	alanine--tRNA ligase	-
GOY09_RS10760 (GOY09_10730)	-	2085039..2085284 (+)	246	WP_226997688.1	IreB family regulatory phosphoprotein	-
GOY09_RS10765 (GOY09_10735)	ruvX	2085277..2085696 (+)	420	WP_086042803.1	Holliday junction resolvase RuvX	-
GOY09_RS10770 (GOY09_10740)	-	2085712..2086023 (+)	312	WP_099482913.1	DUF1292 domain-containing protein	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 90311.48 Da
• Isoelectric Point: 4.5154

>NTDB_id=405755 GOY09_RS10750 WP_211552922.1 2079691..2082084(+) (recD2) [Macrococcoides canis strain LI021]
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDTYTFTGKIVTHPKYGKQLQAD
KFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGEDALNIILDDKSSLDRVPKLSDEKKDLIFNTIHDNQAIEKIM
IRLNEFGFGPQLAMKIYQFYKDDTLKVINESPYQLVMDIEGIGFNKADELAEKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSQVDPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETKAVQILHRLMNHKDQVKQFEQ
SEVLLAIGELESLFEVSYAERQKDALVTAMNSKLMILTGGPGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAA
PTGRASKRLQESTGLEATTIHRLIGWTRENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPNDAQIIFVGDQDQL
PSVGPGQVFKDMIDAQIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDITKRYNDRSFIQCSSSQIPEVIEKIVRSAVN
KGYDMRDIQVLAPIYRGPAGIRALNKVLQEILNPSDENKRELQFGDVYFRTGDKVLQLVNRPEDNVFNGDIGEVTGIFMA
AENALNKDVVIVDYDGSEVTYTKADLMEVTHAYCCSIHKSQGSEFPIVIMPVVNQYFRMLQKNILYTGLTRAKQSLIFCG
DVQAFNEGIKRIGNARFTSFYQFLIDYFKTDEADDTKHDNAGDNVLPFDVGEMTEDNMHLVDPMINMEGITPYDFIS

Nucleotide

• Length: 2394 bp

>NTDB_id=405755 GOY09_RS10750 WP_211552922.1 2079691..2082084(+) (recD2) [Macrococcoides canis strain LI021]
TTGGAAAATATGACTTTGTTTGAGCAATCCTTTGTAAAAGGGACAATAACGAGAATATTATTTTATAACAATGATAATTT
CTATACTGTGCTGAAGGCAGAAGTGATTGAATCAAACGAAGATTTCGATGATGATGCTACGATTACAGGATACCTTCCGC
AAATTGCAGAAGGTGATACATATACGTTCACAGGTAAGATTGTAACGCATCCGAAGTACGGAAAGCAGTTACAGGCAGAT
AAGTTTGAGAAGGATATGCCGCAGTCTCGTGACGGTATTATTCATTATTTATCGAGTGATCTGTTTAAAGGGGTCGGTAA
GAAAACAGCGAGAACAATTGTTGAAGTACTGGGTGAAGATGCGCTAAATATTATTCTCGATGATAAAAGTAGTCTTGACA
GAGTCCCGAAGTTATCAGACGAGAAAAAAGATCTAATTTTTAATACGATACACGACAATCAGGCAATCGAGAAGATTATG
ATTCGTCTGAATGAATTTGGATTCGGTCCACAGCTTGCAATGAAAATCTATCAGTTCTATAAGGATGATACGCTGAAGGT
GATTAATGAATCCCCATATCAACTCGTGATGGATATTGAAGGTATCGGATTTAATAAAGCGGATGAACTGGCAGAGAAAC
TCGGTATCGATAACAATCACCCCGAACGTCTGAAAGCAGCGCTCGTATTTACGATAGAGCAAGCCTCTAATCAGAATGGT
CATACATATATTCCGGACCAGGTGTTACTTGAAACGAGCTTCAATCTACTGACGAAAAATGGTAGTCAAGTCGATCCAGA
CCGTCTCGTTATCGCACTCACTGAACTGACAGAGGAACATAAGCTCGTTGAACATGAGAAGAACATCTATATCCCGAGTC
TATTCTATTCTGAAACGAAAGCTGTACAAATATTGCATCGATTAATGAATCATAAGGACCAGGTGAAACAGTTCGAACAG
TCTGAAGTATTGCTGGCAATCGGGGAACTGGAGTCACTGTTCGAAGTGAGTTATGCAGAACGACAGAAAGATGCGCTTGT
AACGGCAATGAACAGTAAACTGATGATCTTAACAGGGGGACCCGGTACAGGAAAGACGACGGTTGTGCGCGGTATTGTGA
ATTTATATGCTGAACTGCATGGGTTAAGTCTAGATTATGATGACTATGATGGACAGGACTATCCGATTGTTGTCGCAGCA
CCAACTGGTCGTGCATCGAAACGTCTTCAGGAGTCTACAGGACTTGAAGCGACGACAATACACAGGTTAATTGGCTGGAC
GAGAGAGAATAAACCCGATGATGTACTGGAAACGGAAATTACAGCGAAGCTTGTCATTATCGATGAAATGTCGATGGTTG
ATACGTGGCTCATGTTTCAGTTGATGAAAGCTGTGCCGAATGATGCACAGATTATCTTTGTCGGTGACCAGGACCAGCTG
CCATCCGTTGGACCAGGGCAAGTGTTCAAAGACATGATAGATGCACAAATTATGCCGCAGATTGAGCTTAATGAAGTGTA
CAGGCAGCAGGAAGGTTCATCAATCGTTGAACTTGCGCATCAAATTAAGCGTAATGAACCATTTGATATTACGAAACGTT
ATAATGACAGAAGCTTTATACAGTGCTCAAGCAGTCAAATACCAGAAGTGATCGAGAAGATCGTGCGCAGTGCTGTGAAT
AAAGGGTATGACATGCGTGATATACAAGTACTCGCACCGATATATAGAGGACCAGCGGGTATACGTGCGCTGAACAAAGT
GCTGCAGGAAATATTGAATCCAAGTGATGAAAACAAGCGTGAACTACAGTTTGGTGATGTTTATTTCAGGACAGGGGACA
AAGTGCTGCAGCTTGTCAATCGACCGGAAGACAATGTGTTTAACGGTGATATTGGTGAAGTGACGGGTATCTTTATGGCG
GCAGAGAACGCGCTGAATAAAGATGTTGTCATTGTGGATTATGATGGGAGTGAAGTAACGTATACGAAAGCGGATTTAAT
GGAAGTTACACATGCCTACTGCTGCTCCATTCATAAATCACAAGGTTCGGAATTTCCGATTGTCATTATGCCGGTTGTCA
ATCAATACTTCAGAATGCTGCAGAAGAATATACTCTATACCGGATTAACACGCGCGAAACAGTCACTTATTTTCTGTGGA
GATGTACAGGCGTTTAATGAAGGAATAAAGCGAATCGGTAACGCAAGGTTTACAAGCTTCTATCAGTTTCTTATCGATTA
TTTTAAGACAGATGAAGCAGATGATACAAAGCATGATAATGCAGGTGATAACGTATTACCTTTCGACGTTGGTGAGATGA
CTGAAGACAATATGCATCTCGTTGATCCGATGATCAACATGGAAGGTATAACACCCTATGATTTTATAAGTTGA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (671-718)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (584-653)

• AAA domain (AAA_30) (338-544)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	51.801	100	0.523