Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | B18_RS19510 | Genome accession | NZ_CP058332 |
| Coordinates | 4202306..4202902 (+) | Length | 198 a.a. |
| NCBI ID | WP_003087237.1 | Uniprot ID | Q9I3H9 |
| Organism | Pseudomonas aeruginosa strain B18 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4197306..4207902
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B18_RS19485 (B18_19425) | - | 4198246..4198623 (+) | 378 | WP_003083354.1 | hypothetical protein | - |
| B18_RS19495 (B18_19430) | - | 4198877..4199743 (-) | 867 | WP_003120462.1 | ABC transporter substrate-binding protein | - |
| B18_RS19500 (B18_19435) | dnaX | 4199780..4201855 (+) | 2076 | WP_033987495.1 | DNA polymerase III subunit gamma/tau | - |
| B18_RS19505 (B18_19440) | - | 4201901..4202227 (+) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| B18_RS19510 (B18_19445) | recR | 4202306..4202902 (+) | 597 | WP_003087237.1 | recombination mediator RecR | Machinery gene |
| B18_RS19515 (B18_19450) | - | 4203025..4204173 (+) | 1149 | WP_003103930.1 | acyl-CoA dehydrogenase family protein | - |
| B18_RS19520 (B18_19455) | - | 4204186..4204725 (-) | 540 | WP_003103931.1 | CbrC family protein | - |
| B18_RS19525 (B18_19460) | - | 4204799..4205686 (-) | 888 | WP_003103932.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| B18_RS19530 (B18_19465) | - | 4205683..4207266 (-) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| B18_RS30210 | - | 4207389..4207556 (+) | 168 | Protein_3859 | TetR family transcriptional regulator | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21173.42 Da Isoelectric Point: 6.0063
>NTDB_id=405057 B18_RS19510 WP_003087237.1 4202306..4202902(+) (recR) [Pseudomonas aeruginosa strain B18]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRQCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=405057 B18_RS19510 WP_003087237.1 4202306..4202902(+) (recR) [Pseudomonas aeruginosa strain B18]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCAGTGCCGTACCCTCAGCGAGGAGGAGTTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGCGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |